Gene Information

Name : ECO103_2294 (ECO103_2294)
Accession : YP_003222217.1
Strain : Escherichia coli 12009
Genome accession: NC_013353
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 2336796 - 2338367 bp
Length : 1572 bp
Strand : -
Note : Prophage ECO103_P10; predicted protein Orf3 in insertion sequence ISCro1

DNA sequence :
ATGGACACCTCACTTGCTCATGAGAACGCCCGCCTGCGGGCACTGTTGCAGACGCAACAGGACACCATCCGCCAGATGGC
TGAATACAACCGCCTGCTCTCACAGCGGGTGGCGGCTTATGCTTCCGAAATCAACCGGCTGAAGGCGCTGGTTGCGAAAC
TGCAACGTATGCAGTTCGGTAAAAGCTCAGAAAAACTTCGTGCAAAAACCGAACGGCAGATACAGGAAGCACAGGAGCGA
ATCAGCGCACTTCAGGAAGAAATGGCGGAAACGCTGGGTGAGCAATATGACCCGGTACTGCCATCCGCCCTGCGCCAGTC
TTCAGCCCGTAAACCGTTACCGGCCTCACTTCCCCGTGAAACCCGGGTTATCCGGCCGGAAGAGGAATGCTGTCCTGCCT
GTGGTGGTGAACTCAGTTCTCTGGGATGTGATGTGTCAGAGCAACTGGAGCTTATCAGCAGCGCCTTTAAGGTTATCGAA
ACACAACGTCCGAAACAGGCCTGTTGCCGGTGCGACCATATCGTGCAGGCACCAGTACCTTCAAAACCCATTGCACGCAG
TTATGCCGGAGCGGGGCTTCTGGCCCATGTTGTCACCGGGAAATATGCAGACCATCTGCCGTTATACTGCCAGTCAGAAA
TATACCGTCGTCAGGGAGTGGAGCTGAGCCGTGCCACACTGGGGCGCTGGACAGGTGCTGTTGCTGAACTGCTGGAGCCG
CTGTATGACGTCCTGCGCCAGTATGTGCTGATGCCCGGTAAAGTCCATGCTGATGATATCCCCGTCCCGGTCCAGGAGCC
GGGCAGCGGTAAAACCCGGACAGCCCGGCTGTGGGTCTACGTCCGTGATGACCGTAACGCCGGTTCACAGATGCCCCCGG
CGGTCTGGTTCGCGTACAGTCCGGACCGGAAAGGTATCCATCCACAAAATCACCTGGCCGGTTACAGCGGTGTGCTTCAG
GCCGATGCTTACGGTGGTTACCGGGCGTTATACGAATCCGGCAGAATAACGGAAGCCGCGTGTATGGCTCATGCCCGGAG
AAAAATCCACGATGTGCATGCAAGAGCGCCCACCTACATCACCACGGAAGCCCTGCAGCGTATCGGTGAACTGTATGCCA
TCGAGGCAGAGGTCCGGGGCTGTTCAGCAGAACAGCGTCTGGCGGCAAGAAAAGCCAGAGCCGCGCCACTGATGCAGTCA
CTGTATGACTGGATACAGCAACAGATGAAAACACTGTCGCGTCACTCAGATACGGCAAAAGCGTTCGCATACCTGCTGAA
ACAGTGGGATGCACTGAACGTGTACTGCAGTAATGGCTGGGTGGAAATCGACAACAACATCGCAGAGAACGCCTTACGGG
GAGTGGCCGTAGGCCGGAAAAACTGGATGTTCGCGGGTTCCGACAGCGGTGGTGAACATGCGGCGGTGTTGTACTCGCTG
ATCGGCACATGCCGTCTGAACAATGTGGAGCCAGAAAAGTGGCTGCGTTACGTCATTGAACATATCCAGGACTGGCCGGC
AAACCGGGTACGCGATCTGTTGCCCTGGAAAGTTGATCTGAGCTCTCAGTAA

Protein sequence :
MDTSLAHENARLRALLQTQQDTIRQMAEYNRLLSQRVAAYASEINRLKALVAKLQRMQFGKSSEKLRAKTERQIQEAQER
ISALQEEMAETLGEQYDPVLPSALRQSSARKPLPASLPRETRVIRPEEECCPACGGELSSLGCDVSEQLELISSAFKVIE
TQRPKQACCRCDHIVQAPVPSKPIARSYAGAGLLAHVVTGKYADHLPLYCQSEIYRRQGVELSRATLGRWTGAVAELLEP
LYDVLRQYVLMPGKVHADDIPVPVQEPGSGKTRTARLWVYVRDDRNAGSQMPPAVWFAYSPDRKGIHPQNHLAGYSGVLQ
ADAYGGYRALYESGRITEAACMAHARRKIHDVHARAPTYITTEALQRIGELYAIEAEVRGCSAEQRLAARKARAAPLMQS
LYDWIQQQMKTLSRHSDTAKAFAYLLKQWDALNVYCSNGWVEIDNNIAENALRGVAVGRKNWMFAGSDSGGEHAAVLYSL
IGTCRLNNVEPEKWLRYVIEHIQDWPANRVRDLLPWKVDLSSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 0.0 99
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-114 67
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 2e-137 64
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 9e-138 64
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 4e-126 61
tnp AEA34686.1 transposase Not tested Not named Protein 4e-132 60
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 2e-130 60
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 2e-130 60
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 9e-131 60
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 6e-131 60
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 4e-131 60
unnamed AAC31494.1 L0015 Not tested LEE Protein 3e-131 60
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 4e-131 60
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 2e-131 60
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 7e-131 60
unnamed AAL57570.1 unknown Not tested LEE Protein 2e-131 60
unnamed AAL08460.1 unknown Not tested SRL Protein 1e-93 58
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 8e-110 54
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 7e-110 54
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 7e-110 54
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 4e-119 53
tnp AEA34687.1 IS66 family transposase Not tested Not named Protein 2e-71 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO103_2294 YP_003222217.1 hypothetical protein VFG1700 Protein 8e-115 67
ECO103_2294 YP_003222217.1 hypothetical protein VFG0793 Protein 2e-131 60
ECO103_2294 YP_003222217.1 hypothetical protein VFG1051 Protein 6e-94 58
ECO103_2294 YP_003222217.1 hypothetical protein VFG1736 Protein 3e-89 54