Gene Information

Name : ECO103_2059 (ECO103_2059)
Accession : YP_003221990.1
Strain : Escherichia coli 12009
Genome accession: NC_013353
Putative virulence/resistance : Virulence
Product : T3SS effector EspM
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2141437 - 2142027 bp
Length : 591 bp
Strand : -
Note : Prophage ECO103_P08

DNA sequence :
ATGCCGATGAAGACTACAGGTACATCTTTCAGCTCTTTTGGTGTAAGTTGTCATAGAGAAAATTCCTTTCGGAACCCTTT
CCGAGGGAAGAATGATGAGGTCATAAAATGTTCAATTGGAGAGCGGACTATTCGCTTTTCTGTTGACAAATTTAGCGGCA
ATATACTGGATACAGTGCGCAGGCAGAGTGCTAAAAATATTGATGGGTGGGTGAAAGATGAACAGATGGTATATCCATCA
AGGGTGATCAATCAGGAGATTGATAATTACTGTCTTCAAAGAAATGAAAAAATTACTACTGAAGTGAAGCAAAGAGTCTT
TTCTCTTGTGAGTCAAAAATATCAACTAAGTCTTGATATTAAGGCAGCACAAAGTTCTATTAATCATGTAATAATGGGGA
ATGCTTCTTTTGGCAAGAAAATAGATGCTCTTTGTGATGGTATGAGCCGGGATGTAAAAAATCGTACATCAGATAGCATA
GCAAACTTGCTTGCGGACAAGTTTTACCAGAAACATATCGATTCGGATATTGATATTGTGAAACTACGAAATGAGATCCC
AGATTATTTGAGGTTTGCTATACAGGCATAA

Protein sequence :
MPMKTTGTSFSSFGVSCHRENSFRNPFRGKNDEVIKCSIGERTIRFSVDKFSGNILDTVRRQSAKNIDGWVKDEQMVYPS
RVINQEIDNYCLQRNEKITTEVKQRVFSLVSQKYQLSLDIKAAQSSINHVIMGNASFGKKIDALCDGMSRDVKNRTSDSI
ANLLADKFYQKHIDSDIDIVKLRNEIPDYLRFAIQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trcA BAA36747.1 bfpT-regulated chaperone-like protein Not tested LIM Protein 4e-71 83
ECO103_3599 YP_003223456.1 T3SS effector EspM Virulence LEE Protein 5e-45 56
unnamed CAI43854.1 hypothetical protein Not tested LEE Protein 3e-45 56
unnamed AAL60258.1 unknown Not tested LEE Protein 2e-45 56