Gene Information

Name : ECO103_1898 (ECO103_1898)
Accession : YP_003221837.1
Strain : Escherichia coli 12009
Genome accession: NC_013353
Putative virulence/resistance : Unknown
Product : major tail tube protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3498
EC number : -
Position : 1985632 - 1986144 bp
Length : 513 bp
Strand : -
Note : Prophage ECO103_P07

DNA sequence :
ATGGCTGTGCCAAAACATCTTCGCTTTTTTACGCTGTTTGTGGATGGTGAAAACGAAGTGGGTAAGGTGACGTCCGTCAC
TCTGCCTAAGCTGACGCGCAAAACCGACAGCTACCGGGGGGGCGGCATGATGGGTGCGGTAAGTATTGATCTCGGTCTGG
ACGACTCCGCGCTTGATGCGAGCTTTGTCATGGGGGGCGCAGTTCGTGAGCTGTTCCTTAAGTATGGCGGCACGATTGAC
GGCACGCTACTGCGTTTTGCGGGTGAATACTACACCGATGCAGAAAGCGACCTGTATGAAGTCGAAATGCGCGGACGCGT
GACGGAAATTGATATGGGGGAAGCCAAACAGGGCGAAGCCACATCACACACTTACGCCATTAAAAACACCTACTACAAGC
TGAGTGTTAACGATCGTCCGTTGTGGGAGATTGACCTGCTGAACTTCATTTACCGGAAGGACGGCAAGGACATTGTGCCC
GATCGCATCCGTTCCGCGCTTGGGCTTGGCTGA

Protein sequence :
MAVPKHLRFFTLFVDGENEVGKVTSVTLPKLTRKTDSYRGGGMMGAVSIDLGLDDSALDASFVMGGAVRELFLKYGGTID
GTLLRFAGEYYTDAESDLYEVEMRGRVTEIDMGEAKQGEATSHTYAIKNTYYKLSVNDRPLWEIDLLNFIYRKDGKDIVP
DRIRSALGLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4606 NP_458689.1 probable major tail tube protein Not tested SPI-7 Protein 1e-20 47
t4300 NP_807897.1 major tail tube protein Not tested SPI-7 Protein 1e-20 47
unnamed ABR13485.1 phage tail tube protein Not tested PAGI-6 Protein 4e-23 44