Gene Information

Name : ECO103_1701 (ECO103_1701)
Accession : YP_003221646.1
Strain : Escherichia coli 12009
Genome accession: NC_013353
Putative virulence/resistance : Virulence
Product : porcine attaching-effacing associated protein Paa/adherence factor AdfO
Function : -
COG functional category : R : General function prediction only
COG ID : COG4588
EC number : -
Position : 1798535 - 1799281 bp
Length : 747 bp
Strand : -
Note : Prophage ECO103_P06

DNA sequence :
ATGGCAGGTTTTTTAATATTCCTGTCTTCTGCTGCTTATGCTGATATCAATCTGTATGGTCCTGGTGGCCCGCATACAGC
CTTGCTTGATGCAGCCAAACTTTATGCCGAAAAAACAGGTATTATAGTGAACGTTCATTACGGCCCACAGAACAAATGGA
ATGAAGATGCCAAAAAAAATGCAGATATCTTGTTTGGCGCATCAGAACAATCTGCTCTGGCTATCATTCGGGACCATAAA
GACAGCTTCAGTGAAAAAGATATTCAGCCTCTTTATCTGCGAAAAAGTATTTTACTGGTAAAGAAAGGTAATCCTAAAAA
TATCCGGAGTATTGACGACCTGACCAGACCCGGGATTGGCGTAATTGTTAATGATGGTGGTGGTACCAGTAATACATCAG
GCACTGGCGTCTGGGAAGATATTGCCGGACGTAAAGGGAATATAGAAACTGTCGCCGCAATCCGAAAAAATATTATTTTA
TATGCGCCCAATAGCGGAACTGCACGTAAGGCTCTTGAGAATCAGCCTGAAGCAGATGTCTGGATAACCTGGGCTGACTG
GGCAGCCAGTAATCCAGAAATTGGTGATGTCGTGGAAATAGCGCCAGACTACGTGATATGGCGTGATATGAACATTACAG
TACGTCAGGATGCAAATGATGAAACCCGTCGATTTGCAGAATGGCTACAAACCGATGAAGCGGCGCCTGCATTCAAAAAA
TATGGCTGGACCAGGAAAGGCACTTGA

Protein sequence :
MAGFLIFLSSAAYADINLYGPGGPHTALLDAAKLYAEKTGIIVNVHYGPQNKWNEDAKKNADILFGASEQSALAIIRDHK
DSFSEKDIQPLYLRKSILLVKKGNPKNIRSIDDLTRPGIGVIVNDGGGTSNTSGTGVWEDIAGRKGNIETVAAIRKNIIL
YAPNSGTARKALENQPEADVWITWADWAASNPEIGDVVEIAPDYVIWRDMNITVRQDANDETRRFAEWLQTDEAAPAFKK
YGWTRKGT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
acfC AAK20768.1 accessory colonization factor AcfC Virulence VPI Protein 1e-55 51
acfC AAK20798.1 accessory colonization factor AcfC Virulence VPI Protein 1e-55 51
acfC AAA82706.1 AcfC Virulence VPI Protein 1e-55 51
VC0841 NP_230489.1 accessory colonization factor AcfC Virulence VPI-1 Protein 2e-55 51
acfC YP_001216322.1 accessory colonization factor AcfC Virulence VPI-1 Protein 2e-55 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO103_1701 YP_003221646.1 porcine attaching-effacing associated protein Paa/adherence factor AdfO VFG0839 Protein 7e-105 99
ECO103_1701 YP_003221646.1 porcine attaching-effacing associated protein Paa/adherence factor AdfO VFG0105 Protein 8e-56 51