Gene Information

Name : ECO103_1687 (ECO103_1687)
Accession : YP_003221633.1
Strain : Escherichia coli 12009
Genome accession: NC_013353
Putative virulence/resistance : Unknown
Product : IS629 transposase OrfA
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 1790107 - 1790433 bp
Length : 327 bp
Strand : -
Note : Prophage ECO103_P06

DNA sequence :
ATGACTAAAAATACACGTTTTTCCCCCGAGGTCCGTCAACGGGCAGTTCGTATGGTTCTGGAAAGTCAGGGCGAATATGA
CTCACAATGGGCGGCAATTTGTTCCATTGCCCCAAAGATTGGCTGTACACCAGAGACTCTGCGTGTGTGGGTTCGTCAGC
ATGAGCGGGATACCGGGAGTGGTGATGGTGGACTCACCACCGCTGAACGTCAGCGTCTGAAAGAGCTGGAACGTGAAAAT
CGTGAACTGCGCCGCAGTAACGATATCCTTCGCCAGGCTTCCGCTTATTTTGCGAAGGCGGAGTTCGACCGCCTCTGGAA
AAAATAA

Protein sequence :
MTKNTRFSPEVRQRAVRMVLESQGEYDSQWAAICSIAPKIGCTPETLRVWVRQHERDTGSGDGGLTTAERQRLKELEREN
RELRRSNDILRQASAYFAKAEFDRLWKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1199 NP_286734.1 hypothetical protein Not tested TAI Protein 6e-36 100
Z1222 NP_286757.1 hypothetical protein Not tested TAI Protein 6e-36 100
Z1639 NP_287142.1 hypothetical protein Not tested TAI Protein 6e-36 100
Z1661 NP_287163.1 hypothetical protein Not tested TAI Protein 6e-36 100
IS629 CAI43820.1 hypothetical protein Not tested LEE Protein 1e-35 99
IS629 CAI43841.1 hypothetical protein Not tested LEE Protein 1e-35 99
IS629 CAI43908.1 hypothetical protein 1 Not tested LEE Protein 1e-35 99
ECO103_3584 YP_003223442.1 IS629 transposase OrfA Not tested LEE Protein 2e-35 99
unnamed AAF09023.1 unknown Not tested SHI-O Protein 4e-30 99
tnpE AAD44738.1 TnpE Not tested SHI-2 Protein 4e-30 99
IS629 CAC37925.1 hypothetical protein Not tested LEE Protein 1e-35 99
S4062 NP_839231.1 IS629 orfA Not tested SHI-2 Protein 2e-29 98
c5168 NP_757016.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-29 98
unnamed AAL67399.1 TnpE-like protein Not tested PAI II CFT073 Protein 7e-30 98
c5214 NP_757062.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-29 98
unnamed ADD91740.1 hypothetical protein Not tested PAI-I AL862 Protein 7e-30 98
S3184 NP_838467.1 IS629 orfA Not tested SHI-1 Protein 1e-29 98
SF2979 NP_708753.1 IS629 ORF1 Not tested SHI-1 Protein 1e-29 98
SF3706 NP_709445.1 IS629 ORF1 Not tested SHI-2 Protein 4e-30 98
ECO111_3775 YP_003236110.1 putative IS629 transposase OrfA Not tested LEE Protein 5e-32 97
Z4335 NP_289560.1 hypothetical protein Not tested OI-122 Protein 5e-32 97
ECO111_3720 YP_003236060.1 putative IS629 transposase OrfA Not tested LEE Protein 5e-32 97
unnamed CAD42084.1 hypothetical protein Not tested PAI II 536 Protein 1e-28 96
ECUMN_3344 YP_002414020.1 transposase ORF A, IS629 Not tested Not named Protein 1e-28 96
r13 AAC61722.1 R13 Not tested PAI I CFT073 Protein 1e-28 96
unnamed AAL67404.1 R13-like protein Not tested PAI II CFT073 Protein 1e-28 96
c3596 NP_755471.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-28 96
c5177 NP_757025.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-28 96
APECO1_3498 YP_854313.1 transposase; OrfA protein of insertion sequence IS629 Not tested PAI I APEC-O1 Protein 1e-27 94
ORF_36 AAZ04445.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 9e-28 94

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO103_1687 YP_003221633.1 IS629 transposase OrfA VFG0606 Protein 1e-30 98
ECO103_1687 YP_003221633.1 IS629 transposase OrfA VFG0643 Protein 3e-30 98
ECO103_1687 YP_003221633.1 IS629 transposase OrfA VFG1717 Protein 4e-29 96
ECO103_1687 YP_003221633.1 IS629 transposase OrfA VFG1603 Protein 5e-29 96