Gene Information

Name : ECO103_1231 (ECO103_1231)
Accession : YP_003221201.1
Strain : Escherichia coli 12009
Genome accession: NC_013353
Putative virulence/resistance : Virulence
Product : T3SS effector EspK
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1319354 - 1320715 bp
Length : 1362 bp
Strand : -
Note : Prophage ECO103_P03

DNA sequence :
ATGCTTCCTACATCGCAATTACGACCGTCCGGGACATTCTACTCCAATTCCGCAGAAACATCAGCAGGCATCAAAAGCGA
AATCACACCAACTCAGATAGAAGAAGCGCGGGCCATTGGTCGTTTATATATCAAAGATTGTGATATTGAGTATCTGCCAC
AGTTACCAAACGAAATAACATCAGTTACAATCGAAAATTGCAATAACCTGACCACCCTTACAGGATTACCGGTTAATACA
CAAAACCTGTCCGTCATTAACTGTGAAAAATTACAAATCACAGACATACCATCGACAGTAAAAAATCTACATATTGAATT
AACTGATTCACCATTTATACACATCATATCTGAAGGCATCGAATGCCTGACGGTTTGCCACTGCCATATATCTGGAGTGC
CAGAGAGTGTCCGTCATCTTGAGATCAGAGGTTACGCCACAGACGGCATAAAAAATGTTCCAAACGGGTTATTATCTCTC
AGCATCAATCGCTACACCCCAGAAAATCAGGCCAGAATTGACAGCCTGATATCACCGTCACTACAGACGCTATCTCTGAC
TGGATGTAGCAATATTATACTGCCGGAGAAACTCCCGGAGAGTCTGAGATCTGTAACCATTCATGTGGAGCAGAAAACTA
CATGGAACATCGTAGCTGAAGGGGTTCCTGATGGACTGGATCTTGATTTACAAAATGTACTACTCTCTCCGAATGTAATT
AAAGAAAAAAACATCACTTTTCAGGGCAACGCACTGGATGCTGCCTTGCATTTTCGTCCGGGAGACATTGTCTATGGGCT
ATCCTCTCCCAGAGAAAAACTTGTCAACAGCATCAAACTGGTTAACGACTTTTCCAAAAAAGATATCGTAATTCAGAATA
CATTAACAAACGCAGTATGGGACGCCAGAACCCCCCGTAAATATAAGCAAGACTCGCTTATCAAAAGAGCATTAAATGAA
CATGAAAGAGGAACAAAATTTAAACAGTGCTTAAAAAATCACAATAATTATAATGTCATCATGGCCGACCTTTCCATATA
CAATCGAGACAAGTTATGGGCAAAAACAAGCAAGGCAGGCCTAGAGTTTCAAACATTAATTCGCAACAGAACGGTTATGT
TTTGTGCGGATGGGCTTGTCAATTCACTCAAACTCATAGCTAACAAGTCAGAGGGCTATGGTCAGAGTATTACCGCCAGC
GAATTACGATGGATTTATCGTAATAAAGACAACAGCCAAATAATGAAAAACATAAAATTTTATCTGCATGGCAAAGAGAT
ACCAGCAGAAAGAATATTAGATACACCAGAGTGGAAAGACTACCGTCCAAAATACTCCGGTTCCACATATAAATATTCTT
AA

Protein sequence :
MLPTSQLRPSGTFYSNSAETSAGIKSEITPTQIEEARAIGRLYIKDCDIEYLPQLPNEITSVTIENCNNLTTLTGLPVNT
QNLSVINCEKLQITDIPSTVKNLHIELTDSPFIHIISEGIECLTVCHCHISGVPESVRHLEIRGYATDGIKNVPNGLLSL
SINRYTPENQARIDSLISPSLQTLSLTGCSNIILPEKLPESLRSVTIHVEQKTTWNIVAEGVPDGLDLDLQNVLLSPNVI
KEKNITFQGNALDAALHFRPGDIVYGLSSPREKLVNSIKLVNDFSKKDIVIQNTLTNAVWDARTPRKYKQDSLIKRALNE
HERGTKFKQCLKNHNNYNVIMADLSIYNRDKLWAKTSKAGLEFQTLIRNRTVMFCADGLVNSLKLIANKSEGYGQSITAS
ELRWIYRNKDNSQIMKNIKFYLHGKEIPAERILDTPEWKDYRPKYSGSTYKYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO103_3597 YP_003223454.1 T3SS effector EspK Virulence LEE Protein 5e-155 70
unnamed AAL60260.1 unknown Not tested LEE Protein 4e-155 70
unnamed CAI43852.1 hypothetical protein Not tested LEE Protein 4e-155 70