Gene Information

Name : CDR20291_0591 (CDR20291_0591)
Accession : YP_003217095.1
Strain : Clostridium difficile R20291
Genome accession: NC_013316
Putative virulence/resistance : Resistance
Product : two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 729913 - 730626 bp
Length : 714 bp
Strand : +
Note : -

DNA sequence :
ATGATTATGGAGTCAATAAAAGATAAAAAAATACTTGTGGTTGATGACCACAAGGAATTATTAAAAATGATAGATGAAAT
CCTAAGAAAAGAGGGATTTAGTAGAGTATTTTTAGCATCAAGTTATGAAGAAGCTGTTAGGGTATTTAGAAATGTAAAGC
CAGATTGTGCAATTTTAGATGTTGTATTGCCAGATGGAGATGGTTTCTCTATTATGAGAAAAATTAGAGAGACATCTAAG
ATACCAGTTATTTTTCTCTCTGCAAGAGGTGAAGATGAAGATAGATTGATTGGTTTGGGATTAGGGGCTGACGATTATAT
AGTAAAGCCATTTTTACCAAAGGAACTTACTTTAAGGCTTGTGGGTATATTAAATCGTGTATATGTGCCTATAGAAGAAG
AGGAGTTGCCAGTATTTAAACTGGGAGATTCTGTTGTTGTGAATTTAAATAGTGCATGTGTTGAGAAAGATGGGCAAGAG
ATTTCTTTAACAGCTAAAGAGCATTCGTTGCTTTTAAAGTTGTATGAAAATAAAGGGAGAATTGTTACTAATGATTCACT
ATGTCAAGCCATTTGGGGAGATGATATGTATGGATATGAAAATACCCTTATGGTTCATGTTAGAAGGGTTAGAGAGAAGA
TAGAAAAAACTCCATCTACACCTAAACATCTTATTACAGTAAGAGGTCTTGGATATAAGTTGATGATTAATTAA

Protein sequence :
MIMESIKDKKILVVDDHKELLKMIDEILRKEGFSRVFLASSYEEAVRVFRNVKPDCAILDVVLPDGDGFSIMRKIRETSK
IPVIFLSARGEDEDRLIGLGLGADDYIVKPFLPKELTLRLVGILNRVYVPIEEEELPVFKLGDSVVVNLNSACVEKDGQE
ISLTAKEHSLLLKLYENKGRIVTNDSLCQAIWGDDMYGYENTLMVHVRRVREKIEKTPSTPKHLITVRGLGYKLMIN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sboR YP_006309915.1 SboR Not tested FWisland_1 Protein 2e-45 44