Gene Information

Name : tcdE (CDR20291_0583)
Accession : YP_003217087.1
Strain : Clostridium difficile R20291
Genome accession: NC_013316
Putative virulence/resistance : Virulence
Product : cell wall hydrolase protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4824
EC number : -
Position : 714767 - 715267 bp
Length : 501 bp
Strand : +
Note : -

DNA sequence :
ATGCACAGTAGTTCACCTTTTTATATTTCTAATGGTAACAAAATATTTTTTTATATAAACCTAGGAGGCGTTATGAATAT
GACAATATCTTTTTTATCAGAGCATATATTTATAAAGTTAGTAATTTTAACTATATCATTTGATACATTATTAGGATGTT
TAAGTGCAATAAAAAGTCGTAAATTTAATTCTAGTTTTGGAATAGATGGAGGAATCAGAAAAGTAGCAATGATAGCATGT
ATATTTTTTTTATCAGTAGTTGACATTCTTACAAAGTTTAACTTTTTATTTATGTTACCACAAGATTGTATCAATTTTTT
AAGACTAAAACATCTTGGAATATCTGAATTTTTCTCTATTTTATTTATTTTATATGAAAGTGTAAGCATATTAAAAAATA
TGTGCTTATGTGGATTACCAGTACCTAAGAGATTAAAGGAAAAAATAGCAGTTTTACTAGATGCAATGACAGATGAAATG
AATGCTAAGGATGAAAAGTAA

Protein sequence :
MHSSSPFYISNGNKIFFYINLGGVMNMTISFLSEHIFIKLVILTISFDTLLGCLSAIKSRKFNSSFGIDGGIRKVAMIAC
IFFLSVVDILTKFNFLFMLPQDCINFLRLKHLGISEFFSILFILYESVSILKNMCLCGLPVPKRLKEKIAVLLDAMTDEM
NAKDEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tcdE CAA63563.1 - Virulence PaLoc Protein 4e-73 99