|
Name : CDR20291_0530 (CDR20291_0530) Accession : YP_003217034.1 Strain : Clostridium difficile R20291 Genome accession: NC_013316 Putative virulence/resistance : Unknown Product : transposase-like protein b Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0675 EC number : - Position : 644825 - 645934 bp Length : 1110 bp Strand : + Note : - DNA sequence : GTGGAAAAAGCTTATAAGTTTAGAATGTATCCAAATAAAAAACAGCAAGAGTTAATTAACAAAACTTTTGGATGTTGTAG ATTTGTATATAATAAGTATCTTGCTAAAAGAATAGAAGTTTATAAAAACGATAAAGAAACTTTTACTTATAAACAGTGTA GTTCTGATTTGACCAATTTAAAAAAAGAATTAAAGTGGCTTAAAGAACCTGACAAATTTTCACTACAAAACGCCTTAAAA GATTTAGATAATGCATATAAAAAATTCTTTAAAGAAAAAGCAGGATTTCCTAAATTTAAATCAAAGAAAATTAATAGATT TTCATATAAAACTAACTTTACAAATGGAAATATCGTGTATTGTGGTCAACATATAAAACTACCTAAACTTGGTATGGTTA AGATAAGGGATAAACAAGTACCTCAAGGTAGAATACTTAATGCTACTATATCTAAAGAACCAAGTGGTAGATATTATGTA TCATTATGTTGTACTGATGTAGATATTGAAGCATTTGAAAATACTAATAATCAGATAGGTTTAGATTTAGGAATTAAAGA ATTTTGTATCTCAAGTTGTGGAGAATTTATAGAAAATCCTAAGTATCTTAAGAAGTCATTAAACAAACTTGCTAAATTAC AAAGAGAATTATCGAGAAAGACAATCGGTAGTTTAAATAGAAATAAAGCAAGATTAAAAGCTGCAAGACTTCAAGAACAT ATAGCTAATCAAAGAAATGATTTTCTACAAAAACTATCTACTAAATTAATAAAAGAGAATGATATTATTTGCATAGAAGA TTTACAAGTAAAGAATATGATTAAAAATCGTAAACTATCTCGCTCAATTTCAGATGTATCATGGTCAGAGTTTATTCGTC AATTAGAATACAAGGCTAATTGGTATGGTAGACAAATTGTAAAGGTAGGTAAATTCTTTGCAAGTTCACAAATATGCAAT AAATGTGGGTATAAAAACGAGGAAGTGAAGAACTTAAATATAAGAGAATGGATTTGTCCTAGTTGTAATGAAACTCACGA TAGAGATATAAATGCAAGTATAAATATATTAAAAGAAGGATTAAGACTAATAACAATTCAAAATAAATAA Protein sequence : MEKAYKFRMYPNKKQQELINKTFGCCRFVYNKYLAKRIEVYKNDKETFTYKQCSSDLTNLKKELKWLKEPDKFSLQNALK DLDNAYKKFFKEKAGFPKFKSKKINRFSYKTNFTNGNIVYCGQHIKLPKLGMVKIRDKQVPQGRILNATISKEPSGRYYV SLCCTDVDIEAFENTNNQIGLDLGIKEFCISSCGEFIENPKYLKKSLNKLAKLQRELSRKTIGSLNRNKARLKAARLQEH IANQRNDFLQKLSTKLIKENDIICIEDLQVKNMIKNRKLSRSISDVSWSEFIRQLEYKANWYGRQIVKVGKFFASSQICN KCGYKNEEVKNLNIREWICPSCNETHDRDINASINILKEGLRLITIQNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CPR_0626 | YP_697953.1 | ISCpe2, transposase orfB | Not tested | Not named | Protein | 5e-78 | 49 |
