|
Name : CDR20291_0426 (CDR20291_0426) Accession : YP_003216933.1 Strain : Clostridium difficile R20291 Genome accession: NC_013316 Putative virulence/resistance : Resistance Product : ABC transporter ATP-binding protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1136 EC number : - Position : 511806 - 512474 bp Length : 669 bp Strand : - Note : - DNA sequence : ATGATTATAAAAGCAAAACAATTATCAAAAATATATGGTTCTAATAACAATAAAGTTATAGCACTTAATAATGTAAATTT AAAAATAAACTCAGGTGAATTTGTTTCTGTAATTGGACCTTCTGGAAGTGGAAAAAGCACACTTTTACATATTTTAAGTG GATTAGATAATCCTACCTCTGGACAAGTGTTACTTGATGATAAAGATATATATAAACACACTGAAAAAGAACTATCTGCA CTTAGAAGAAAATCCTTTGGATTCGTCTTTCAACAATTTAATCTTTTACCTGTTCTTACAGCATCTGAAAATATTTCAAT GCCTGTACTTCTAGATAAAAAACAACCTGATAAAGACTATTTAAATGAAATTTCATCATTACTTGGAATTGCAGATAGAC TCAATCATCTTCCCCATGAACTTTCAGGCGGTCAGCAACAAAGAGTTGCAATCGCTAGAGCACTTATTGCAAAACCAGAT ATAATATTTGCTGATGAGCCTACAGGAAACTTGGACAGTAAAAGTGGCAGTGAAGTTATGAATCTTCTTATAAAAACTTC AAAACAGTTTGGAAAGACTTTAGTGGTAATTACTCATGATGATAGAATTGCAAAACTTGCTGATAGAAAAATTTCAATTA TTGATGGTGTTCTTATGGAGGTGAAATAG Protein sequence : MIIKAKQLSKIYGSNNNKVIALNNVNLKINSGEFVSVIGPSGSGKSTLLHILSGLDNPTSGQVLLDDKDIYKHTEKELSA LRRKSFGFVFQQFNLLPVLTASENISMPVLLDKKQPDKDYLNEISSLLGIADRLNHLPHELSGGQQQRVAIARALIAKPD IIFADEPTGNLDSKSGSEVMNLLIKTSKQFGKTLVVITHDDRIAKLADRKISIIDGVLMEVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Cp1002_1464 | YP_005681730.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 7e-35 | 46 |
| CpC231_1466 | YP_005683828.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 2e-35 | 45 |
| cpfrc_01473 | YP_003783873.1 | hypothetical protein | Not tested | PiCp 5 | Protein | 2e-35 | 45 |
| CpI19_1473 | YP_005685914.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 2e-35 | 45 |
| cur_1502 | YP_001800896.1 | cell division ATP-binding protein FtsE | Not tested | Not named | Protein | 9e-27 | 43 |
| unnamed | AAP55232.1 | unknown | Not tested | SaPIbov2 | Protein | 2e-30 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CDR20291_0426 | YP_003216933.1 | ABC transporter ATP-binding protein | CP001581.1.gene598.p | Protein | 6e-52 | 55 |
| CDR20291_0426 | YP_003216933.1 | ABC transporter ATP-binding protein | CP001581.1.gene798.p | Protein | 2e-51 | 50 |
| CDR20291_0426 | YP_003216933.1 | ABC transporter ATP-binding protein | NC_012469.1.7686878. | Protein | 2e-40 | 47 |
| CDR20291_0426 | YP_003216933.1 | ABC transporter ATP-binding protein | NC_008702.1.4606598. | Protein | 7e-33 | 47 |
| CDR20291_0426 | YP_003216933.1 | ABC transporter ATP-binding protein | NC_012469.1.7685735. | Protein | 1e-31 | 41 |
