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Name : malL (CDR20291_0410) Accession : YP_003216917.1 Strain : Clostridium difficile R20291 Genome accession: NC_013316 Putative virulence/resistance : Unknown Product : oligo-1,6-glucosidase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 494012 - 495676 bp Length : 1665 bp Strand : + Note : - DNA sequence : ATGGAAAAGAAATGGTGGCAAAAAGAAATCGTTTATCAAATTTATCCAAGAAGCTTTCAAGATAGTAATAATGATGGAAT TGGAGATTTACAGGGAATTATTTCTCGTTTAGATTATTTAAAAGATTTAGGTATTACATCATTGTGGTTATGTCCAATTT TTAAATCACCTATGGACGATAATGGGTATGATATTAGTGATTATTTAGATATTGCAAGTGAATTTGGAAGTATGGAAGAT TTAAAAGAGTTAATTAAAGAAAGTAAAGATAGAGGAATCAAAATTATATTAGATTTAGTTCTTAATCATACAAGTGATGA ACATCCTTGGTTTCAAGAAGCATTAAAAAATCCAGAAAGTCCTTATCATGATTATTATATTTTTAAAAAAGGAAACGATT TACCAAATAACTGGAGGTCTGTTTTTGGTGGAAGTGTTTGGGAAAAGGTAGAGAATAGAGACGAATATTATTTTCATTCT TTTGGTAAAAAACAACCTGACCTTAATTGGGAAAATCCAATATTAAGAAGTGAACTTTACCAAATGATTAATACCTGGTC TCAAATGGGAGTGGCAGGATTTAGAGTTGATGCTATTACATTTATCAAAAAGAATTTAAGTTTTCAAAGTTTAGAAAGTG ATGGTGTTGATGGTCTTGTTAAATGTACAAAAACAGTTAGAAATCAGCCTGGAATAGAAAAAATGCTTTATGAATTAAAA GAAAATACGTTTAAAAAATATGATTGTATGACTGTTGCTGAAGCAGCAGGTATTAGCTATGACCAACTAGGTGATTTTAT TGGAGAAGATGGTTTCTTTTCAATGGTCTTTGACTTTAAACATGCTGACTTAGATGTTGCTTCTGGTAGTGAGTGGTTTA AAAGAATTTCATGGACAATTCCAGATTTAAGAAAATGCATTTTAGATAGCCAAATGTATGTTCAGGAACATGGATGGGCA GCTAATTTTATTGAAAATCATGACCAACCAAGAGCTACAACAAAGTATCTTTTGCAATACGAAAGGAATGATGATGCAGT AAAAATGTTGGGAGCAATGTATTTCTTTTTAAGAGGAACACCATTTATTTATCAGGGACAGGAATTAGGAATGACAAATT TTAAAAGAGATACCATAAATGATTTTAATGATTTATCTAGCATTGACCAATACTATCGTTCAATAGATGAAGGTTACTCA GAAGAAGAAGCGTTAGAATTTGTGAATTTAAGAAGCCGAGATAATGCAAGAACGCCATTTCCATGGGCAGATAAAGAAAA TGCAGGTTTTTCAGATGCAACACCATGGTTAAAGGTTATTGAAAATTATAAAGATATTAATGCACAGAGTCAGATTAACA ATTCAGAAAGTATTTTAGAATTTTATAAAAAGATGATAAAGTTGAGACAAGATAGTAAGTATTCTGATTGTTTGATTTAT GGTTCAATAGAACCTATTGATATAGAAAGTGACAATGTTATTGCGTATAGAAGGCAATTAGATTTGGTAGTTATTGATTG TTATTATAATTTTTCTGATAAACTTGTAGAAATAAAAACAGAAGAAAAATATGATATTGTATTCCAAAATTTAGATGATA TAAATCTACTAAATAAAACAGTGAGTTTGAAACCATTTCAAGCAGTATTATTGAAAGTGAGGTAG Protein sequence : MEKKWWQKEIVYQIYPRSFQDSNNDGIGDLQGIISRLDYLKDLGITSLWLCPIFKSPMDDNGYDISDYLDIASEFGSMED LKELIKESKDRGIKIILDLVLNHTSDEHPWFQEALKNPESPYHDYYIFKKGNDLPNNWRSVFGGSVWEKVENRDEYYFHS FGKKQPDLNWENPILRSELYQMINTWSQMGVAGFRVDAITFIKKNLSFQSLESDGVDGLVKCTKTVRNQPGIEKMLYELK ENTFKKYDCMTVAEAAGISYDQLGDFIGEDGFFSMVFDFKHADLDVASGSEWFKRISWTIPDLRKCILDSQMYVQEHGWA ANFIENHDQPRATTKYLLQYERNDDAVKMLGAMYFFLRGTPFIYQGQELGMTNFKRDTINDFNDLSSIDQYYRSIDEGYS EEEALEFVNLRSRDNARTPFPWADKENAGFSDATPWLKVIENYKDINAQSQINNSESILEFYKKMIKLRQDSKYSDCLIY GSIEPIDIESDNVIAYRRQLDLVVIDCYYNFSDKLVEIKTEEKYDIVFQNLDDINLLNKTVSLKPFQAVLLKVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 6e-98 | 41 |
