Gene Information

Name : CDR20291_0307 (CDR20291_0307)
Accession : YP_003216815.1
Strain : Clostridium difficile R20291
Genome accession: NC_013316
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG5426
EC number : -
Position : 364009 - 364752 bp
Length : 744 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAAAAGTATTAATAGTAGGGGAATCTTGGGTAAAAAATATAACTCATATAAAAGGATTTGATACGTTTGTTACAAC
TCATTATGAAGAAGCTGTAAAGTGGTTGAAAGAAGCAATAGAATCTGGAGGATATGAGACAGTTCATATGCCTGCACATG
TAGCAGCAGATAGTTTTCCGTATAAATTAGAAGAGTTAAATGAGTATGACTGTATAATATTATCTGATATAGGTTCTAAT
ACGTTCTTATTATCTAATAGTACTTTTATAGATTGCAATAGTAATCCAGATAGACTTGAACTAATCAAAGAGTATGTAAA
TAATGGTGGGGCGTTAATCATGGTAGGTGGATATATGTCATTTACAGGAATAGATGCAAAAGCTAGATTTGGAGAAACTG
CTATCAAAGATGTATTACCAATAACAATGATAGATAAAGATGATAGAGTTGAAAAACCAGCAGGAATAATTCCAGAAGTT
ATTGACTCTGAACATCCAGTATTAAAAGGTATACCAACAGAATGGCCAAAGTTTTTAGGATATAACAAAACAGTAGCTAG
AGATAATTGTCCTGTTTTAGCAACTATTGGAGGAGACCCATTTGTAGCTGTTGGCGAGTTTGGAAAAGGAAAATCTGCTA
TCTTTAGTTCTGACTGTGCACCTCACTGGGGTCCAAAAGAATTTACTGATTGGAAATACTATAATAAATTATGGGTTAAT
ATGCTTGATTGGTTAACATGCTAA

Protein sequence : 
MKKVLIVGESWVKNITHIKGFDTFVTTHYEEAVKWLKEAIESGGYETVHMPAHVAADSFPYKLEELNEYDCIILSDIGSN
TFLLSNSTFIDCNSNPDRLELIKEYVNNGGALIMVGGYMSFTGIDAKARFGETAIKDVLPITMIDKDDRVEKPAGIIPEV
IDSEHPVLKGIPTEWPKFLGYNKTVARDNCPVLATIGGDPFVAVGEFGKGKSAIFSSDCAPHWGPKEFTDWKYYNKLWVN
MLDWLTC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1077 YP_853097.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 2e-62 51
orf245 NP_460346.1 hypothetical protein Not tested SPI-2 Protein 4e-55 47
ORF 245 CAB37418.1 - Not tested SPI-2 Protein 3e-55 47
STY1741 NP_456145.1 Orf 245 protein Not tested SPI-2 Protein 1e-54 47
t1249 NP_805053.1 hypothetical protein Not tested SPI-2 Protein 1e-54 47
SC1402 YP_216389.1 hypothetical protein Not tested SPI-2 Protein 4e-55 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CDR20291_0307 YP_003216815.1 hypothetical protein VFG0482 Protein 2e-55 47