Gene Information

Name : ssb (CDR20291_3522)
Accession : YP_003219997.1
Strain : Clostridium difficile R20291
Genome accession: NC_013316
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 4174635 - 4175069 bp
Length : 435 bp
Strand : -
Note : -

DNA sequence :
ATGAATCAAGTTGTATTAGTGGGAAGGTTGACTAGAGACCCTGAATTAAGATACATCCCAGGTACAGGAACACCAGTGGC
ATCCTTTACAATAGCCATTGATAGAGACTATGTAAAAAAAGATGGATCTAAAGAAACTGATTTTATACCTGTTGAAGTAA
TGGGGAAATCTGCTGAATTTTGTGCTAACTACATAACTAAAGGTAGATTAGTAGCACTTCAAGGATCTATAAGAGTAGAC
AATTATCAGACACAATCAGGTGAAAAGAGAACTTTTACAAAAGTAAGTACTAGATCAGTACAAGCTTTGGATAGTAAAAA
TAAATCGGAAAATTCATATAGAGAGAGTGCTCCAGCTTTTGAGCCAAGCTTTGAACCTCAAGGTTTAGACCCACAAGGTT
TTCAAGCTATAGATGATGACGATATACCATTTTAA

Protein sequence :
MNQVVLVGRLTRDPELRYIPGTGTPVASFTIAIDRDYVKKDGSKETDFIPVEVMGKSAEFCANYITKGRLVALQGSIRVD
NYQTQSGEKRTFTKVSTRSVQALDSKNKSENSYRESAPAFEPSFEPQGLDPQGFQAIDDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 5e-17 45
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 8e-17 45
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 5e-17 44
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-17 42
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 1e-14 41
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 7e-16 41