Gene Information

Name : CDR20291_3467 (CDR20291_3467)
Accession : YP_003219942.1
Strain : Clostridium difficile R20291
Genome accession: NC_013316
Putative virulence/resistance : Unknown
Product : conjugative transposon protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4116900 - 4117793 bp
Length : 894 bp
Strand : +
Note : -

DNA sequence :
ATGTTTAAAAAGAAAGAAAAACCAGTAAAAGAAACGAAAGTCCGCACTATGAAAGTAGGCACACATAAGAAATCTGTGAT
TGCTCTGTGGGTGGTGCTTATCGCCAGCGTATCATTTGGCGTGTATAAGAACTTTACCGCCATTGATATGCACACGGTAC
ATGAAACGGAAACCATTCAGTTAAGACTAAATGACACCAACGGAGTTGAAAATTTTGTGAAGAACTTCTGTAAGTCCTAC
TACACATGGGACAACAGCAAGGAAGCTATCGAAGCAAGGACGCAGGCAATCAGCAACTATCTGACAAAGGAGTTGCAGGA
CTTGAACCTTGATACCATTAGGACGGATATACCGACAAGCTCCACTGTTACAAATGTACTGATTTGGGATATAAAACAGT
CTGGAACGAACGATTTTATCGCTACCTACGAAGTAGATCAGCAGATAAAAGAGGGAGAACAGACAAGCAATGTCAAAGCA
ACCTATACCGTCAAAGTCCATGTGGATAAAGACGGCGATATGGTTATCGTACAGAACCCAACCATTGCACCAGCGATTGA
AAAATCAGACTATGAGCCAAAGGCACAAGAAGCCGACGCAAGCGTGGACGCAGATACCGTCAATGACGCTACCGCATTTT
TGGAAACTTTCTTTAAGCTGTATCCGACAGCAACAGAAAAAGAACTTGCCTACTATGTGGCTGGCAATGTGCTTGAACCT
ATCGGCAGGGACTACCTCTATTCCGAATTAGTCAATCCTATGTTTACGGATGACAGGGATAATGTGAAAGTCAGGGTTGC
GGTGAAATTCATTGATAATCAGACAAAGGCAATGCAGGTATCACAGTTTGAGCTTGTGTTACATAAGGATAGCAACTGGA
AAATTATTATGTAA

Protein sequence :
MFKKKEKPVKETKVRTMKVGTHKKSVIALWVVLIASVSFGVYKNFTAIDMHTVHETETIQLRLNDTNGVENFVKNFCKSY
YTWDNSKEAIEARTQAISNYLTKELQDLNLDTIRTDIPTSSTVTNVLIWDIKQSGTNDFIATYEVDQQIKEGEQTSNVKA
TYTVKVHVDKDGDMVIVQNPTIAPAIEKSDYEPKAQEADASVDADTVNDATAFLETFFKLYPTATEKELAYYVAGNVLEP
IGRDYLYSELVNPMFTDDRDNVKVRVAVKFIDNQTKAMQVSQFELVLHKDSNWKIIM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smi_1696 YP_003446798.1 hypothetical protein Not tested The aminoglycoside resistance gene cluster Protein 3e-112 87
SSU05_0923 YP_001198289.1 Tn916 hypothetical protein Not tested 89K Protein 2e-74 54
SSU98_0929 YP_001200487.1 Tn916 hypothetical protein Not tested 89K Protein 2e-74 54