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Name : CDR20291_3466 (CDR20291_3466) Accession : YP_003219941.1 Strain : Clostridium difficile R20291 Genome accession: NC_013316 Putative virulence/resistance : Unknown Product : cell wall hydrolase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0791 EC number : - Position : 4115877 - 4116884 bp Length : 1008 bp Strand : + Note : - DNA sequence : ATGAAACTAAGACATATCGCTATTGTTGGCAGTCTGTTTTCTATCCTCTTTTCTCTCGTATTATTCTTTGGGGTTCTGAT TAGTGCCGAGGACGACGACGGGGGCAATGGTTATTCCTCTAATTATGTAGGTATGAACCTATCTGCCGAAGTCTTGAAAC ATCAGCCTATGGTAGAAAAGTATGCCAAAGAAAACGGTATTTCCGAGTATGTCAATGTGTTGCTGGTAATCATACAAGTG GAAAGTGGCGGTACAGCCGAGGACGTTATGCAAAGCTCTGAAAGTCTGGGACTACCACCCAACTCACTAGATACGGAAAG CTCAATCAAGCAGGGGTGTAAATATTTTGCGTCCCTGCTTTCTTCCTGCAAAAATCAAGGTATCAGTGATATAAATGTTG TGATACAGTCCTATAACTATGGCGGTGGCTATGTTGGCTATGTGGCAGGAAACGGAAAAAAGCATATGTTCAACCTTGCG GAAAACTTCGCAAGGGATAAGTCGGGCGGTCAAAAAGTAACCTATACGAACCCTATCGCCGTGGCAAAAAATGGTGGCTG GCGTTATGGCTATGGAAATATGTTCTATGTGGAGCTTGTGAACCAGTACCTTGTTGTCAATCAAGTATCGGGCGAGCTGG CACAAAAGGTTATGAATGAAGCCTTAAAATATCAAGGTTGGAAGTATGTATATGGTGGCAGTAACCCGAACACTTCTTTT GATTGTTCGGGACTGGTACAGTGGTGCTACAACAAAGCTGGCGTATCTTTACCGAGAACCGCACAAAATCAGTATGACGC AACCCAGCATATCCCACTATCGCAGGCAAAGGCAGGCGATTTGGTCTTTTTCCACAGTACCTACAATGCAGGAAGCTATG TAACCCACGTCGGTATCTATGTAGGAAACACTCAGATGTATCATGCAGGCGACCCTATCGGATATGCCGATTTAAACAAT GCTTATTGGCAACAGTACTTGATTTGTGCTGGAAGAATAAAACAGTAG Protein sequence : MKLRHIAIVGSLFSILFSLVLFFGVLISAEDDDGGNGYSSNYVGMNLSAEVLKHQPMVEKYAKENGISEYVNVLLVIIQV ESGGTAEDVMQSSESLGLPPNSLDTESSIKQGCKYFASLLSSCKNQGISDINVVIQSYNYGGGYVGYVAGNGKKHMFNLA ENFARDKSGGQKVTYTNPIAVAKNGGWRYGYGNMFYVELVNQYLVVNQVSGELAQKVMNEALKYQGWKYVYGGSNPNTSF DCSGLVQWCYNKAGVSLPRTAQNQYDATQHIPLSQAKAGDLVFFHSTYNAGSYVTHVGIYVGNTQMYHAGDPIGYADLNN AYWQQYLICAGRIKQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smi_1695 | YP_003446797.1 | hypothetical protein | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-118 | 89 |
| SSU05_0924 | YP_001198290.1 | hypothetical protein | Not tested | 89K | Protein | 1e-97 | 69 |
| SSU98_0930 | YP_001200488.1 | hypothetical protein | Not tested | 89K | Protein | 1e-97 | 69 |
