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Name : CDR20291_3464 (CDR20291_3464) Accession : YP_003219939.1 Strain : Clostridium difficile R20291 Genome accession: NC_013316 Putative virulence/resistance : Unknown Product : conjugative transposon protein Function : - COG functional category : R : General function prediction only COG ID : COG0433 EC number : - Position : 4111313 - 4113745 bp Length : 2433 bp Strand : + Note : - DNA sequence : ATGTTCCCGATTAAATATATCGACAACAACCTTGTCTGGAACAAGGACAATGAGGTGTTCGCCTACTATGAGCTGATACC TTACAATTACAGTTTTCTATCCGCTGAACAGAAATTCATTGTGCATGACAGCTTCCGACAGCTAATCGCACAATCCCGTG AGGGCAAGATACACGCTTTGCAGATTGCCACAGAAAGCTCAAGCCGAAGCATACAAGAACAGTCAAAGAAGCTGGTTACG GGACGACTAAAAGACGTTGCCTATCAGAAGATAGACGAACAGACCGAAGCGTTAGTATCTATGATTGGGGACAATCAAGT GGACTACCGCTTTTTTCTTGGCTTCAAGCTCATGGTAACAGACCAGAGCATGAACCTAAAGAGCGTGAAGCAATCGGCGT TTCTCACATTCAAGGAGTTTATCCATGAAGTGAACCACACGCTGATGAATGACTTTGTTTCCATGCCAAATGATGAAATC AACCGCTACATGAAAATGGAAAAGCTGTTGGAAAATAAAATAAGCCGACGCTTCAAAGTAAGACGCTTAGATAAAAATGA CTTCGGCTATCTGATTGAACACATCTACGGCAGGGACGGTGTCGCCTATGAAGATTATGAGTATAGCTTACCGAAGAAGA AACTGAAAAAGGAAACGCTGATAACGCATTATGACTTGATACGTCCGACCCGTTGCCTTGTGGAAGAAAGCCAGCGACAT TTACGCTTGGAACATGAGGACAGCGAAAGCTACGTTTCCTACTTTACTGTCAATGCGATTGTCGGCGAGCTTGATTTTCC GTCCAGTGAAATCTTCTATTTCCAGCAACAGCAGTTTACTTTTCCCGTTGATACCAGCATGAATGTAGAAATCGTGGAAA ACCGAAAAGCGTTATCGACGGTTCGCAACAAGAAAAAAGAGCTGAAAGATTTAGACAATCATGCATACCAGTCTGGCAGT GAAACCAGCTCAAATGTGGTAGACGCATTAGACAGTGTGGACGAGCTGGAAACGGATTTAGACCAGTCCAGAGAAAGTAT GTATAAGCTCTCTTATGTTATCCGTGTATCTGCTCCAGACCTTGACGAGTTGAAAAGACGCTGTGATGAAGTCAAAGACT TCTACGACGATTTGAACGTCAAGCTGGTACGCCCTGCTGGCGATATGCTGGGGCTTCACTCTGAATTTCTTCCTGCCAGC AAGCGATACATCAACGATTATGTGCAGTATGTCAAAAGTGATTTTCTAGCTGGGCTGGGCTTTGGTGCGACACAGCAGTT AGGGGAAAACACGGGTATCTATATCGGCTATTCTGTCGATACGGGACGCAATGTTTATCTACAACCGTCCCTTGCCAGTC AAGGCGTAAAAGATACGGTTACTAATGCTCTTGCTTCTGCCTTTGTAGAAAGTCTTGGCGGTGGAAAATCATTCTGTAAC AACCTGCTTGTCTACTACTCTGTGCTGTTTGGCGGTCAAGCGGTAATCTTAGACCCAAAATCCGAGCGTGGCAACTGGAA AGAAACGCTCCCAGAAATCGCCCATGAAATCAATATCGTGAACCTTACCAGCGACAGAGAAAATGCAGGGCTTCTTGACC CGTTCGTGATTATGCAGAATGTGAAAGACGCTGAAAGTCTGGCAATCGACATACTCACATTCCTTACGGGCATTTCTTCA AGGGACGGCGAGAAGTTCCCCGTACTTAGAAAGGCAGTGCGTGCCGTTACCCAGAGCGACCAGCGAGGATTGCTCCATGT GATTGAGGAATTAAGAAAAGAAGATACACCTATCTCTTGCAATATTGCCGACCATATCGACAGCTTCACGGACTACGACT TTGCACATCTGCTGTTCTCGGACGGTACGGTGCAAAATGCAATCAGCTTAGACAACCAGCTCAATATCATTCAAGTAGCC GACTTAGTGCTACCCGATAAGGACACGACCTTTGAATTACTGTCCGTTTCCATGCTGATTGTGATTAGTACCTTTGCGTT AGATTTTATCCACTCGGATAGAAGTGTTTTCAAGATTGTAGACCTTGACGAAGCATGGGCGTTCTTAAATGTGGCACAAG GCGAAACGCTCTCTAACAAGCTGGTTCGTGCTGGACGTGCCATGAACGCAGGCGTTTATTTTGTTACACAGTCCTCTGGC GACGTGTCAAAGGAAAGTCTGAAAAACAATATCGGTTTGAAATTTGCCTTTAGAAGCACCGATATTAACGAAATAAAACA GACCCTTGAATTTTTCAGCATTGACAAAGAGGACGAGAACAACCAGAAGCGATTGCGTGATTTGGAAAACGGGCAATGCT TGCTTCAAGATTTATACGGACGTGTGGGCGTGGTGCAGATACACCCAGTCTTTGAAGAATTACTGCACGCCTTTGATACC AGACCGCCGATACAGCGAAATGAGGTGGAGTGA Protein sequence : MFPIKYIDNNLVWNKDNEVFAYYELIPYNYSFLSAEQKFIVHDSFRQLIAQSREGKIHALQIATESSSRSIQEQSKKLVT GRLKDVAYQKIDEQTEALVSMIGDNQVDYRFFLGFKLMVTDQSMNLKSVKQSAFLTFKEFIHEVNHTLMNDFVSMPNDEI NRYMKMEKLLENKISRRFKVRRLDKNDFGYLIEHIYGRDGVAYEDYEYSLPKKKLKKETLITHYDLIRPTRCLVEESQRH LRLEHEDSESYVSYFTVNAIVGELDFPSSEIFYFQQQQFTFPVDTSMNVEIVENRKALSTVRNKKKELKDLDNHAYQSGS ETSSNVVDALDSVDELETDLDQSRESMYKLSYVIRVSAPDLDELKRRCDEVKDFYDDLNVKLVRPAGDMLGLHSEFLPAS KRYINDYVQYVKSDFLAGLGFGATQQLGENTGIYIGYSVDTGRNVYLQPSLASQGVKDTVTNALASAFVESLGGGKSFCN NLLVYYSVLFGGQAVILDPKSERGNWKETLPEIAHEINIVNLTSDRENAGLLDPFVIMQNVKDAESLAIDILTFLTGISS RDGEKFPVLRKAVRAVTQSDQRGLLHVIEELRKEDTPISCNIADHIDSFTDYDFAHLLFSDGTVQNAISLDNQLNIIQVA DLVLPDKDTTFELLSVSMLIVISTFALDFIHSDRSVFKIVDLDEAWAFLNVAQGETLSNKLVRAGRAMNAGVYFVTQSSG DVSKESLKNNIGLKFAFRSTDINEIKQTLEFFSIDKEDENNQKRLRDLENGQCLLQDLYGRVGVVQIHPVFEELLHAFDT RPPIQRNEVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSU05_0926 | YP_001198292.1 | hypothetical protein | Not tested | 89K | Protein | 0.0 | 78 |
| SSU98_0932 | YP_001200490.1 | hypothetical protein | Not tested | 89K | Protein | 0.0 | 78 |
