Gene Information

Name : gtaB (CDR20291_3325)
Accession : YP_003219800.1
Strain : Clostridium difficile R20291
Genome accession: NC_013316
Putative virulence/resistance : Virulence
Product : utp--glucose-1-phosphate uridylyltransferase (general stress protein 33)
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1210
EC number : -
Position : 3957235 - 3958200 bp
Length : 966 bp
Strand : -
Note : -

DNA sequence : 
ATGCAAGTTAAAGTTAAAAAGGCTGTAATACCAGCAGCAGGTTTAGGAACTAGATTTTTGCCAGCTACAAAGGCACAACC
AAAAGAGATGTTACCAATAGTTGATAAGCCAACTCTACAATACATAATAGAAGAAGCTGTGGCCTCAGGAATAGAGGAAA
TACTAATAATAACAGGTAGAAATAAAAAATCTATTGAAGACCACTTTGATAAATCTGTAGAATTGGAACTTGATTTAGAG
AAAAAAGGTAAGAAAGAATTGTTGGAGGTAGTACAAAACATATCTAACATGATTAACATACATTATATAAGACAAAAAGA
GCCAAAAGGATTGGGAGATGCAATTTATTGTGCGAGGCATTTTATAGGTGATGAGCCGTTTGCAGTAATGTTAGGGGATG
ATATTGTAGATAATGATGTACCTTGTCTAAAACAACTAACAGATGCATATGAGGAATATAGAACTACAATATTGGGTGTT
CAAAAGGTAAATCAAGAAGATACTAATAAATATGGGATAATAGAAGCAAAAAATATAGAAGGTAGAGTTTACAAGGTAAA
AGACATGGTAGAAAAGCCAGAGTCAGGAAAAGCTCCTTCAAATATTGCTATTTTAGGTAGATATATAATAACTCCTGAAA
TCTTTGATATTCTTAAGGATTTACCACCAGGTAAAGGTGGAGAGGTACAACTTACAGATGCTTTAAAAATATTATCTAAG
AAAGAAGCTATGTATGCATACAATTTTGAAGGCAAGAGATATGATGTTGGGGACAAGCTAGGATTTTTAGAAGCTACTGT
TGACTTTGCTCTAAAGAAAGAAGACCTTAAGGAAGATTTTATAAAATATTTGAAACATGTATGTAGTGAATTTGATAAAA
ATAACAATGTGTTATACAATAATACAGATGAAAAAATAGATTTAATTGAAGTCAATGAAGCTAGAGAACTTGAAATTCAA
AAATAA

Protein sequence : 
MQVKVKKAVIPAAGLGTRFLPATKAQPKEMLPIVDKPTLQYIIEEAVASGIEEILIITGRNKKSIEDHFDKSVELELDLE
KKGKKELLEVVQNISNMINIHYIRQKEPKGLGDAIYCARHFIGDEPFAVMLGDDIVDNDVPCLKQLTDAYEEYRTTILGV
QKVNQEDTNKYGIIEAKNIEGRVYKVKDMVEKPESGKAPSNIAILGRYIITPEIFDILKDLPPGKGGEVQLTDALKILSK
KEAMYAYNFEGKRYDVGDKLGFLEATVDFALKKEDLKEDFIKYLKHVCSEFDKNNNVLYNNTDEKIDLIEVNEARELEIQ
K

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0059 YP_300149.1 UTP-glucose-1-phosphate uridylyltransferase Not tested SCC15305cap Protein 2e-75 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gtaB YP_003219800.1 utp--glucose-1-phosphate uridylyltransferase (general stress protein 33) VFG0964 Protein 2e-69 53