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Name : CDR20291_3204 (CDR20291_3204) Accession : YP_003219679.1 Strain : Clostridium difficile R20291 Genome accession: NC_013316 Putative virulence/resistance : Resistance Product : two-component system response regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 3819358 - 3820194 bp Length : 837 bp Strand : - Note : - DNA sequence : TTGAATTTGTCTATTAGAGATGTTACTATTAGTAATGTAAAAGCAAGAGTAGTGAATATAAAAAAACAAGATATTGATAC TGCAAGATTAGAATATAATAAATTTTTATGGAGAGATTTCAATATGGATACATATTTTAATAAAAAAATATTACTTGTTG ATGATGAAAAAGATATAGTAGATTTAATTGAAGAAGTACTCATAAATGATGGTTTTAAAAACATTATTAAAGCTTATAAT GGTTTAGATGCTATTTCGCTGTGTAAGATAGCATGTCCAGATGTTGTCATTCTTGATATAATGTTACCAGATATAGATGG TATAGAAGTGTGTAAAAAAATTCGAGAGTTTTCATACTGTTCTATTCTTTTTTTATCATCAAAAAATGATGATATTGACA AAATACTAGGTCTTAGTAGTGGGGGAGATGACTATATAACAAAGCCATTCAGTCCAAGAGAAATTGCTTTTCGAGTTAAA GCGCAATTACGTAGACAACAGTATCAAAGCATTGTACCATCAGATAGTGCAGTTATTAAAATAGGAGATATTACTATTGA TATAGAAGGAAACCGTGTATATAAAGATAGAAATGAGATTGAGTTAACTGGAAGGGAGTATCATCTTTTAAGCTACATGG CTCAAAATGTAAATAAAATTATAGGAAAAGAAAGACTCTATGAACAAGTATGGGGAGTATATAGTAGTATTTGTGACAAT ACAATTATGGTGCATATACGACATATAAGAGAAAAAATTGAAGATAACCCCTCAAATCCTAAAATACTTATAACGGTTAA AGGACTAGGATATAAACTTGTGAATAGAATCGATTAG Protein sequence : MNLSIRDVTISNVKARVVNIKKQDIDTARLEYNKFLWRDFNMDTYFNKKILLVDDEKDIVDLIEEVLINDGFKNIIKAYN GLDAISLCKIACPDVVILDIMLPDIDGIEVCKKIREFSYCSILFLSSKNDDIDKILGLSSGGDDYITKPFSPREIAFRVK AQLRRQQYQSIVPSDSAVIKIGDITIDIEGNRVYKDRNEIELTGREYHLLSYMAQNVNKIIGKERLYEQVWGVYSSICDN TIMVHIRHIREKIEDNPSNPKILITVKGLGYKLVNRID |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sboR | YP_006309915.1 | SboR | Not tested | FWisland_1 | Protein | 9e-36 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CDR20291_3204 | YP_003219679.1 | two-component system response regulator | AM180355.1.gene1830. | Protein | 7e-38 | 45 |
| CDR20291_3204 | YP_003219679.1 | two-component system response regulator | NC_012469.1.7685629. | Protein | 7e-39 | 45 |
| CDR20291_3204 | YP_003219679.1 | two-component system response regulator | NC_002952.2859905.p0 | Protein | 5e-43 | 45 |
| CDR20291_3204 | YP_003219679.1 | two-component system response regulator | NC_007622.3794472.p0 | Protein | 4e-43 | 45 |
| CDR20291_3204 | YP_003219679.1 | two-component system response regulator | NC_002745.1124361.p0 | Protein | 4e-43 | 45 |
| CDR20291_3204 | YP_003219679.1 | two-component system response regulator | NC_009782.5559369.p0 | Protein | 4e-43 | 45 |
| CDR20291_3204 | YP_003219679.1 | two-component system response regulator | NC_002951.3237708.p0 | Protein | 4e-43 | 45 |
| CDR20291_3204 | YP_003219679.1 | two-component system response regulator | NC_003923.1003749.p0 | Protein | 3e-43 | 45 |
| CDR20291_3204 | YP_003219679.1 | two-component system response regulator | NC_002758.1121668.p0 | Protein | 4e-43 | 45 |
| CDR20291_3204 | YP_003219679.1 | two-component system response regulator | NC_009641.5332272.p0 | Protein | 4e-43 | 45 |
| CDR20291_3204 | YP_003219679.1 | two-component system response regulator | NC_013450.8614421.p0 | Protein | 4e-43 | 45 |
| CDR20291_3204 | YP_003219679.1 | two-component system response regulator | NC_007793.3914279.p0 | Protein | 4e-43 | 45 |
| CDR20291_3204 | YP_003219679.1 | two-component system response regulator | DQ212986.1.gene4.p01 | Protein | 1e-36 | 44 |
| CDR20291_3204 | YP_003219679.1 | two-component system response regulator | AF130997.1.orf0.gene | Protein | 4e-34 | 43 |
| CDR20291_3204 | YP_003219679.1 | two-component system response regulator | NC_005054.2598277.p0 | Protein | 7e-38 | 41 |
| CDR20291_3204 | YP_003219679.1 | two-component system response regulator | NC_014475.1.orf0.gen | Protein | 7e-38 | 41 |
| CDR20291_3204 | YP_003219679.1 | two-component system response regulator | AF155139.2.orf0.gene | Protein | 7e-34 | 41 |
