Gene Information

Name : CDR20291_3181 (CDR20291_3181)
Accession : YP_003219656.1
Strain : Clostridium difficile R20291
Genome accession: NC_013316
Putative virulence/resistance : Resistance
Product : two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3795668 - 3796327 bp
Length : 660 bp
Strand : -
Note : -

DNA sequence :
ATGTCTAAGATATTAGTAGTAGATGATGAGTTAGATATGTTAAAGTTGATTGAAAATGTGTTGAAAAGAGATGGACATGA
AGTAAAGGTAATTAGTGATGTAGAAAAGGCTATGAACATGGATTTTAATTATTTTAATCTAATAATATTAGATGTTATGA
TGCCTAAGATGGATGGTTTTGAAGTATGTAAAACTATAAGAAATAAGGTTGATTGTCCAATACTGTTTTTGACAGCAAAA
AATATGGAAAGTGATATTATGTACGGTCTTGGCATAGGTGCAGATGACTATATAACCAAACCTTTTGGTGTAGGAGAATT
AAGGGCTAGGATAACTGCTCATTTAAGGCGAGAAAGTAGAGAAAAAAAGAATTTATTAACTATCTCAAATGTTCAATTTA
ACTTTTTAGGCAAAGAAGTTTCAATTGATGGTAAAAAAATTAATTTTACTAAAAGTGAATATCTAATATGTGAATTTCTA
GCAAAAAATAAGGGACAAGTATTTTCAAAAGAAAGAATATATGAGTCGGTATATGGTTTTGATGGAGAAAGTGATATAAG
TACTATCACAGAGCATATAAAAAATATACGAAGCAAATTAAAACAATATGATATTTATACAATAGAAACTGTATGGGGGA
TAGGGTATAAATGGGTGTAA

Protein sequence :
MSKILVVDDELDMLKLIENVLKRDGHEVKVISDVEKAMNMDFNYFNLIILDVMMPKMDGFEVCKTIRNKVDCPILFLTAK
NMESDIMYGLGIGADDYITKPFGVGELRARITAHLRRESREKKNLLTISNVQFNFLGKEVSIDGKKINFTKSEYLICEFL
AKNKGQVFSKERIYESVYGFDGESDISTITEHIKNIRSKLKQYDIYTIETVWGIGYKWV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nisR2 YP_006309922.1 NisR Not tested FWisland_1 Protein 7e-38 43
SSU05_0907 YP_001198273.1 NisR Not tested 89K Protein 3e-34 43
nisR YP_006309898.1 NisR Not tested FWisland_1 Protein 3e-39 42