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Name : CDR20291_3074 (CDR20291_3074) Accession : YP_003219549.1 Strain : Clostridium difficile R20291 Genome accession: NC_013316 Putative virulence/resistance : Unknown Product : glycine/betaine ABC transporter ATP-binding protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1125 EC number : - Position : 3669546 - 3670307 bp Length : 762 bp Strand : - Note : - DNA sequence : ATGACACCTATTATACAATTTAAAAATATTAAAAAACAATATAATGATAAAACTATAATAGATAATCTTAATTTAGATAT AGAAAAAGGAGAGTTTTTGACTGTAATTGGTTCGTCTGGTTCTGGTAAGACAACACTCTTAAAAATGATTAATGGTCTGA TTTTGCCAGATGGAGGAAATATTTTGATAAACCAAACAGATATCAAAAACGAGGACTTAATTAAATTAAGAAGAAGAATA GGATATTGTGTACAAGGAAGTGTTCTTTTTCCTCATATGACTGTTGAAGAAAATATTTCATATGTACCAAATCTCCTAAG TAAAAAGAATAAATTAGAAGTAAAAAGTGCTGTAAACAAGTGGATGGAAATAGTGGGATTGCCAAATGATATGAAAGTGC GTTACCCATCAGAATTGTCAGGTGGTCAGCAACAACGTGTAGGGATTGCAAGAGCTTTAGCTTCTTCTCCAGAAATTTTA TTAATGGATGAACCTTTTGGTGCAGTTGATGAGATTACACGAAAGCAATTACAAAAAGAGATAAAAGAAATTCATAAAAA AACAGGAGTTACGATTATCTTTATTACGCATGATATTTATGAAGCTTTGATTTTGGGAACAAAGACTTTGGTATTAAATC ATGGAGTTGTTCAACAGTATGATACTCCTGAGAATATTTTAAATACTCCTGCTAACCAATTTGTAGACCAGTTATTGAAT ATAAGAAAATCTATAATAGATGATGATAATTTAAAAGAATAA Protein sequence : MTPIIQFKNIKKQYNDKTIIDNLNLDIEKGEFLTVIGSSGSGKTTLLKMINGLILPDGGNILINQTDIKNEDLIKLRRRI GYCVQGSVLFPHMTVEENISYVPNLLSKKNKLEVKSAVNKWMEIVGLPNDMKVRYPSELSGGQQQRVGIARALASSPEIL LMDEPFGAVDEITRKQLQKEIKEIHKKTGVTIIFITHDIYEALILGTKTLVLNHGVVQQYDTPENILNTPANQFVDQLLN IRKSIIDDDNLKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 7e-47 | 45 |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 5e-47 | 45 |
