Gene Information

Name : CDR20291_3003 (CDR20291_3003)
Accession : YP_003219478.1
Strain : Clostridium difficile R20291
Genome accession: NC_013316
Putative virulence/resistance : Virulence
Product : phage transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 3583525 - 3583725 bp
Length : 201 bp
Strand : -
Note : -

DNA sequence :
ATGGGAATCAATTTAAAAATATTTAGGATTAAAAAAGGTTTAAAGCAACAAGAACTGGCAGATAGAGTTGGTATATCAAG
ATATTATTTGTCAAACTTGGAAACAGGTAAGGCTAATAATCCAAGCAATGATTTGATGATTAAACTATCTAGAGCTTTAG
ATACAACAGTAGAAGAATTATTTTTTAGTAAGGAGGAGTAA

Protein sequence :
MGINLKIFRIKKGLKQQELADRVGISRYYLSNLETGKANNPSNDLMIKLSRALDTTVEELFFSKEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 0.043 42
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 0.064 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CDR20291_3003 YP_003219478.1 phage transcriptional regulator VFG2168 Protein 0.018 42
CDR20291_3003 YP_003219478.1 phage transcriptional regulator VFG2175 Protein 0.018 42