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Name : treA (CDR20291_2930) Accession : YP_003219406.1 Strain : Clostridium difficile R20291 Genome accession: NC_013316 Putative virulence/resistance : Unknown Product : trehalose-6-phosphate hydrolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 3474138 - 3475805 bp Length : 1668 bp Strand : + Note : - DNA sequence : ATGAAAAATTGGTGGAAAAAAGCAACTGTCTATCAAATATATCCAAAAAGTTTCAAAGATAGCAACAATGATGGTATAGG TGATATAAATGGTATTATAGAAAAATTAGATTATCTGTATTCTTTAGGTGTTGATTTATTATGGTTGACTCCTATGTACG TTTCTCCTCAAAGAGATAATGGATATGATATAGAAGATTATTATAATATAGACCCAAAATATGGGACAATGAGTGACTTT GAAAAACTCTTAAAAGAAGCTCATAAAAGAGACATAAAAATAATGATGGATATGGTCCTAAACCATACATCTACTGAACA TAAATGGTTTAAAGAATCTAAAAAAAGCAAAGACAATCCATATCGTGATTATTATTTCTGGAAAGATGCTAAACCTGATG GTTCTGTTCCTAATAACTGGATATCCAGATTTAGTGGAACTGCTTGGAAATATGATGAAACTACTAACCAATATTATTTA CATTTATTTGAAGAAACTCAAGCTGATTTAAATTTGGAAAATGAAAAGGTTCGTGAAGAATGTTACAAAGTACTAGAATT TTGGGCTGATAAAGGTATTGATGGTTTTCGTTTAGATGTAGTCAACCTACTCTCCAAAACACCTGGATTACCTGATGACC CTATAACAGGGCCAAAAGGAGATGGAAGAACTCATTACGCTGATGGTCCTCGTATACACGAATATTTACATAATATGAAT CAAAAAGTTTTCAAACCTAAAAATATAGTTACTGTAGGTGAAATGTCATCTACTACACCTGAAGAGTGTATCAACTATAC TAGAGAAAATCGAGAAGAACTATCTATGGTTTTTAGCTTCCATCATATGAAAACAGATTATAAAGGAGGCGCAAAATGGA CTAATGAAATGTTCTCTCTGGATAAATTAAAAAAAGCACAATCTGACTTTCAATATAAAATGTATGAAGGAAAGGGATGG AATGCTCTATTTTACTCTAATCACGACCAACCTAGAGCTTTATCTCGATTTGGAGATGATAGATTTTTTCGTCAAGAAAG TGCTAAGATGTTAGCCATAACACTATTTGGTCTACAAGGTACTACATACATATATCAAGGTGAAGAAATAGGTATGACAA ATGCCTACTTTACTAAAATAGATGAATATGATGATGCTGAAAGTAAGAATGCATACTATCATATGATTAAATCTGGTATT GATGAAAAGGAGGCATTGCTTATACTTCAACAAAAATCCAGAGATAATGCCCGTACTCCTATGCAATGGGATAATACTAT TTATAAGGGGTTTTCTAATCATAAACCGTGGTTAAAAGTTAATAATGACAATATTAGTGTAGAAAATGAGCTTAATGATT CTCGTTCAGTATTTTATACTTATCAAAGATTAATCAAATATCGTAAACAATATGATATTTTTACAGAAGGTACTTATAGA TTGTTAGATGAAAATCATAAAAATCTATTTGTTTATGAAAGAGAGTATAAAAACCAAAATCTTCTTGTTATAAGTAATTT TACTCATGATAATGTAGTATATAAATTACCTGAAACTTATTTGAATAAATTAAACTACACAATACTTGAAACCAATTACA CTAGAGATATAATTGAAAATAAAATGGAAATAAAACCTTACGAAAGTATAATGATATATTATAAATAA Protein sequence : MKNWWKKATVYQIYPKSFKDSNNDGIGDINGIIEKLDYLYSLGVDLLWLTPMYVSPQRDNGYDIEDYYNIDPKYGTMSDF EKLLKEAHKRDIKIMMDMVLNHTSTEHKWFKESKKSKDNPYRDYYFWKDAKPDGSVPNNWISRFSGTAWKYDETTNQYYL HLFEETQADLNLENEKVREECYKVLEFWADKGIDGFRLDVVNLLSKTPGLPDDPITGPKGDGRTHYADGPRIHEYLHNMN QKVFKPKNIVTVGEMSSTTPEECINYTRENREELSMVFSFHHMKTDYKGGAKWTNEMFSLDKLKKAQSDFQYKMYEGKGW NALFYSNHDQPRALSRFGDDRFFRQESAKMLAITLFGLQGTTYIYQGEEIGMTNAYFTKIDEYDDAESKNAYYHMIKSGI DEKEALLILQQKSRDNARTPMQWDNTIYKGFSNHKPWLKVNNDNISVENELNDSRSVFYTYQRLIKYRKQYDIFTEGTYR LLDENHKNLFVYEREYKNQNLLVISNFTHDNVVYKLPETYLNKLNYTILETNYTRDIIENKMEIKPYESIMIYYK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 2e-122 | 52 |
