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Name : CDR20291_2905 (CDR20291_2905) Accession : YP_003219381.1 Strain : Clostridium difficile R20291 Genome accession: NC_013316 Putative virulence/resistance : Unknown Product : glycosyl hydrolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1501 EC number : - Position : 3437589 - 3439667 bp Length : 2079 bp Strand : - Note : - DNA sequence : GTGATAAAAATATCTGAAGACTATATTGAAAAAAGATTTGACAATGAACTATTGCGAATAGAAGCATGGGGAAAAAACTC TTTACGTATTAGGTCGTTTGTAGACCAAAATTTTGTTGATGAAAACTATGCTCTTAACGAAAAACCTAAGTTAAATAAAG ATGATATTACAATTAATAAAAATGAAGATGGAAGTGCAATCATTAAAAATGGAAAGATAAAAGCTGTCTTAGACCATAGA GATAGAATTACTTTTTATAATGATAAAAATGAAATATTATTGAAAGAATATATTCGATTAAGAGCTGTAAAACATGATGA TGGTGGAGAAGATGTAGGGACAATTGAGATTACCAAAGACTTTAACTCTACTCTAAAGTTAAAATCAAGAGAATATCGAC CAAGCTATAGTGGAGAATTTGAAGTAACTACTAGATTTGAATCTGAGCCTTCTGAAAAGATTTTTGGAATGGGACAATAT CAACATAAATTTTTAGATTTAAAGAATACTGTTTTGGAGTTAGCCCAAAGAAATTCTCAAATATCAGTTCCTTTTTATAT TTCTAGTCTAGGTTATGGACTTTTATGGAATAATCCGGGAATTGGAAAAGTATCTTTTGCTAAAAATATGACAGAATGGA AGATGTTTTCTACAAATTTTATAGATTATTGGATTACTTGTGGAGAAAGCCCAAAAGAGTTAAATAAAAATTATTCTCAA GTTACTGGAACTGTTCCTATGATGCCTGAAAACCTTTTAGGACTATGGCAAAGTAAACTAAGATATAGAACTTCAGAAGA AGTTTTAGATGTTGTGAAGGAATATTCTAAAAGAGGAATTAAGCTTTCATCAATTGCAATTGACTATTTTCATTGGCCTA AGCAAGGTGAATATAAATTTGACTTAGATTATTGGAAAAATCCTAAAGAATTAGTTAAAAAATTGAAAGAAGAGTATTCA GTAGAACCAATAGTATCTGTATGGCCTACAGTTCAAAGTGATGCAGAAAACTACAATGATTATTTAGAAAATGGCTATTT AGTCAATGTTAATCGTGGTGTTAGAATGACAATGCAAATTCAAGGAAATACAGTCTTTGTAGATATGACAAATGAAAATG CAAGAGAATATGTTTGGGATAGAATAGATAAAAATTATAAACAACTTGGGATTGACTATTATTGGTTAGATGTAGCTGAA CCTGGCTATTCTGTGTATGATTTTGATAACTATAGATATAAAAAAGGAAATGTTTTAAGTTGTGGTAATATTTATCCTAT TGATTATTTAAAAATGATTTATGATGGTTTACATAATGACATAGAGTCTGTTGTAACTCTTGTAAGAGGAGCTTGGGCAG GAGCTCAAAAGTATGGAGCTTTAGTATGGTCTGGTGACATTGATTCTAGTTTTGAGGCTTTTAATAATCAAGTAAATACA GGGTTAAATATGGGACTGGCAGGTATACCATGGTGGACTACTGATATTGGAGGTTTCCATGGAGGAAATCCTAAAGACCC AGAATTTAGAGAACTTATGGTAAGATGGTTCCAATATGCTACTTTTTCACCAATTTTGAGAATGCATGGAGATAGATTGC CTCATAGTAAACCATTATCAAATAAAGGTGGAGGCTCAATGGTAACTGGAGCTCCTAATGAAATATGGTCTTATGGTGAA GAAGTTGAAGTAATTCTTACAAAATTCATAAAAATTAGAGAGAGCTTAAAAACTTATTTAAAAAAACTGATGAAAGAAGC GCATGAAGATGGAACACCAGTTATGAGAACTTTATTTTATGAATTTCCTGAAGATGATAAAACTTGGGAGGTGGATAATA CATATATGCTTGGAGATGAAATTTTGGTAGCTCCAATAATGAATTATAAAGATAGAAGTAGAAAAGTATATTTACCAAAA GGACATACATGGGAAAATATATTTAGTGGAGTTAGTTATGAAGGTGGGAAAACTTATGAAGTTGAATGCCCGCTGGAAGA AATTCCTATTTTCCTAAAGCAAGATTCCAGTTATAATTTTAAAGAACTAAAAAATATTTTGGGAGAGGTGAAATCATAA Protein sequence : MIKISEDYIEKRFDNELLRIEAWGKNSLRIRSFVDQNFVDENYALNEKPKLNKDDITINKNEDGSAIIKNGKIKAVLDHR DRITFYNDKNEILLKEYIRLRAVKHDDGGEDVGTIEITKDFNSTLKLKSREYRPSYSGEFEVTTRFESEPSEKIFGMGQY QHKFLDLKNTVLELAQRNSQISVPFYISSLGYGLLWNNPGIGKVSFAKNMTEWKMFSTNFIDYWITCGESPKELNKNYSQ VTGTVPMMPENLLGLWQSKLRYRTSEEVLDVVKEYSKRGIKLSSIAIDYFHWPKQGEYKFDLDYWKNPKELVKKLKEEYS VEPIVSVWPTVQSDAENYNDYLENGYLVNVNRGVRMTMQIQGNTVFVDMTNENAREYVWDRIDKNYKQLGIDYYWLDVAE PGYSVYDFDNYRYKKGNVLSCGNIYPIDYLKMIYDGLHNDIESVVTLVRGAWAGAQKYGALVWSGDIDSSFEAFNNQVNT GLNMGLAGIPWWTTDIGGFHGGNPKDPEFRELMVRWFQYATFSPILRMHGDRLPHSKPLSNKGGGSMVTGAPNEIWSYGE EVEVILTKFIKIRESLKTYLKKLMKEAHEDGTPVMRTLFYEFPEDDKTWEVDNTYMLGDEILVAPIMNYKDRSRKVYLPK GHTWENIFSGVSYEGGKTYEVECPLEEIPIFLKQDSSYNFKELKNILGEVKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0551 | NP_814321.1 | glycosyl hydrolase | Not tested | Not named | Protein | 0.0 | 70 |
| ef0077 | AAM75281.1 | EF0077 | Not tested | Not named | Protein | 0.0 | 70 |
