|
Name : CDR20291_2904 (CDR20291_2904) Accession : YP_003219380.1 Strain : Clostridium difficile R20291 Genome accession: NC_013316 Putative virulence/resistance : Unknown Product : PTS system transporter subunit IIC Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG3715 EC number : - Position : 3436810 - 3437589 bp Length : 780 bp Strand : - Note : - DNA sequence : ATGGAGCCACAATTATGGCAATTATTATTAATCGTACTATATGGATTTTTTATAAACTATGAAAAAAATTCAACAATGTT TGGAACATATCAACCAGTAACAGCAGGTTTTATTACTGGTCTTATCTTAGGAGATATAAATACAGGGTTATATATTGGAG GTACATTACAGCTATTATCATTAGGTATTAGTAACTTTGGTGGAGCATCAATACCTGATTATCAAACAGCAAGTATAGTA GCCACATTTATAACTATTACGACTAAGCAAGAAGCATCTGTAGGAATCTCTATAGGTATTCCAGTTGCTTTATTGATGGT ACAATTAGATGTTCTTAGAAATACTATTGGTATATGGCTAGTTCATAAAGCAGAAGATGGAGCTAAAAAAGGAAATTATA AAAATATAACCTATATGCAAATGTTAGGAGTACTATTAACAGCAGCTACAACAGGTATTCCAGTTGCTCTATCTGTAATA TTTGGACCTTCTTTAATTAATACCATTTTGAAATATACACCTGAATGGTTAACAGGTGGTTTAACAGTAGCTGGAGGACT ACTTCCAGCAGTAGGGATAGGATTATTACTTAGATATCTTCCTGCTAAGGAGTATTTTAGTTACTTAGTAATTGGTTTTG TTTTAGCAGTATATATGAAAGTACCATTATTAGGTGTAGCTTTAATTGGTGGAGCAATTGCACTTATAATTTACAAAAAG AATTTGGAAAATCAAGAACAACAATATACTGTAGTAGGAGGTATGGACGAAGATGAGTGA Protein sequence : MEPQLWQLLLIVLYGFFINYEKNSTMFGTYQPVTAGFITGLILGDINTGLYIGGTLQLLSLGISNFGGASIPDYQTASIV ATFITITTKQEASVGISIGIPVALLMVQLDVLRNTIGIWLVHKAEDGAKKGNYKNITYMQMLGVLLTAATTGIPVALSVI FGPSLINTILKYTPEWLTGGLTVAGGLLPAVGIGLLLRYLPAKEYFSYLVIGFVLAVYMKVPLLGVALIGGAIALIIYKK NLENQEQQYTVVGGMDEDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0552 | NP_814322.1 | PTS system transporter subunit IIC | Not tested | Not named | Protein | 8e-84 | 84 |
| ef0078 | AAM75282.1 | EF0078 | Not tested | Not named | Protein | 6e-84 | 84 |
