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Name : CDR20291_2903 (CDR20291_2903) Accession : YP_003219379.1 Strain : Clostridium difficile R20291 Genome accession: NC_013316 Putative virulence/resistance : Unknown Product : PTS system transporter subunit IID Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG3716 EC number : - Position : 3436008 - 3436817 bp Length : 810 bp Strand : - Note : - DNA sequence : ATGAGTGATAAGGTATCATTAAATAAATCAAATGAAAAGGTGAAAAAAAGTGTCTTATGGCGCTGGTTTTTTACTAGTTC TGTTTCTTCAAATTATGAGAAGATGCAGGCCTTGGCATACTGTTATGCAGTACTACCTTTTTTAAAAGTAGTATACAAAG ATAATCCAGAAAAGTTACAAAGTGCTGTATTAAATCATTTACAATTTTTTAACACTAATCCTTGGGTTGCCCCTTATATT TTGGGTATTAATGTAGCAATGGAGGAGTTATCAAGTGAAGAGACTGAAGAGGCTGTTGCTTCAATTAAAACAGGCTTGAT GGGACCAGTAGCAGGTTTAGGAGATAGTTTATTTGTCGTTATTCCGTGGACAATTTTTGGAGCTATAGCAGCTAATATGG CGATAGATGGAAGTCCATTTGGAATCTTACTGTGGATTGTAGTGAGTGTAGCATTGAAATTATTAAGTATACCACTATTT AATGCTGGCTATACATCAGGTACTAAGCTAATATCTTCAATTGAAAAAAGTTTAAAGATTTTAACTGAGAGTACATCTAT TTTAGGTTTAATGGTTGTAGGTGCATTAATACCTTCAGTTGTAAAAGCTAATGTTGCTTTGAACTTTCAACAAGGTGATT TTACAATGAAAGGTCAAGAAATATTAGACCAAATTATGCCTGGGTTAGTTCCTGCAATTTTAGTTGTGATTGTTTATTGG GCTCTTAAAAAGAATATAAAACCTATATACTTAATTTTAGGAGTAATGGTTGTTTCAATAATTTTATATGCATTAGGTAT TTTAAAATAA Protein sequence : MSDKVSLNKSNEKVKKSVLWRWFFTSSVSSNYEKMQALAYCYAVLPFLKVVYKDNPEKLQSAVLNHLQFFNTNPWVAPYI LGINVAMEELSSEETEEAVASIKTGLMGPVAGLGDSLFVVIPWTIFGAIAANMAIDGSPFGILLWIVVSVALKLLSIPLF NAGYTSGTKLISSIEKSLKILTESTSILGLMVVGALIPSVVKANVALNFQQGDFTMKGQEILDQIMPGLVPAILVVIVYW ALKKNIKPIYLILGVMVVSIILYALGILK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0553 | NP_814323.1 | PTS system transporter subunit IID | Not tested | Not named | Protein | 2e-99 | 86 |
| ef0079 | AAM75283.1 | EF0079 | Not tested | Not named | Protein | 1e-99 | 86 |
