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Name : CDR20291_2902 (CDR20291_2902) Accession : YP_003219378.1 Strain : Clostridium difficile R20291 Genome accession: NC_013316 Putative virulence/resistance : Unknown Product : PTS system transporter subunit IIB Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG3444 EC number : - Position : 3435506 - 3436000 bp Length : 495 bp Strand : - Note : - DNA sequence : ATGATATTAGATATGGAAATGAAAGGTATTAAAAATATTCGTATAGATGACCGTTTAATCCATGGTCAAGTTGCAACTAT GTGGAGTAATAAATTGGGTGTTACAAGATTAATGGTAGTAAATGATGCAGTAGCTAACAATTCTGTTCAAAAACAAGTTT TAAGAATGGCTACACCTGCAGGTATAGCGTCATCTATAATTACAGAAGAGACTGCTATAAAAAATATTACTGCAGGAAAG TATGAAGGACAAAATGTATTATTAATTGTTAAGTCTCCTGTGGACCTTATTCCATTTGTAGAGGCAGGATTTAAAATACA TAATATAAATGTAGGAAATATGTCAAGTAGAAAAGATACAACAGTTCTAAGACCTAATATCAGTGTTACTGAAGAAGAGA AAGAAGCATTTAAAAGACTTTTAGATGAAGGAATTGAAATTACAACTATAATGACGCCTGATGATAAGAAAACTTATCTT GTAGACATCTTATAG Protein sequence : MILDMEMKGIKNIRIDDRLIHGQVATMWSNKLGVTRLMVVNDAVANNSVQKQVLRMATPAGIASSIITEETAIKNITAGK YEGQNVLLIVKSPVDLIPFVEAGFKIHNINVGNMSSRKDTTVLRPNISVTEEEKEAFKRLLDEGIEITTIMTPDDKKTYL VDIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0554 | NP_814324.1 | PTS system transporter subunit IIB | Not tested | Not named | Protein | 1e-58 | 80 |
| ef0080 | AAM75284.1 | EF0080 | Not tested | Not named | Protein | 7e-59 | 80 |
