|
Name : xylR (CDR20291_2900) Accession : YP_003219376.1 Strain : Clostridium difficile R20291 Genome accession: NC_013316 Putative virulence/resistance : Unknown Product : xylose repressor Function : - COG functional category : K : Transcription COG ID : COG1940 EC number : - Position : 3433699 - 3434925 bp Length : 1227 bp Strand : + Note : - DNA sequence : ATGCAAAATAACCTTTTATTTTTGTGTAAAAAGTATTACAATATTATTTTAAGGAGGAATATCAAATTGGTTACTGATAA ATACACTATTCGAGAAATGAATGAAAGATTGGTACTTGAACAAATTATAAAAAATGGTCCTATTTCTAGGGCAAGTATAG CTTCTACTATAGGATTGAATAAAGCAACTATATCCGCTATTACCAAAAAACTTATTGATGAATCTCTAGTTCATGAAATA GGAATTGGAAATAGTACTCATAGTGGCGGAAGAAAACCCATATTATTAGTATTTAATAAATGTGCAGGGATTTCTTTAAG TATGGACATTGGATACGACTATATATTTTCTTCTCTATCTTACTTAGATGGAACTATTATAAATTCTAAGAAATTAACAG ATATACAAGTAAGTAAAGACAATGTTATACAATTGATAGATGAAATTATAAATAGTTATAACATATCCAAAATAGACACT CCTTATAAGGTAATTGGTCTTACTTTGGCTATACATGGGATTACTTGTGAAAATAAAGTATTGTTTACTCCATATTATAA TCTTAATGAGATTGACTTATATAGCATCCTTAGCAAAAAGTATGACTTTCCTATTCATATAGAAAATGAAGCAAACTTAA CAGCTTTAGCTGAGAATACTTTTTCAACTGTACATAACTCACTACTTAGTCTCAGTATTCACAGTGGATTTGGTTCAGGC ATTATAATAAATAATAAATTATATAGCGGCAGAAATGGTATGAGTGGAGAAATTGGTCACACTATCATCATGCCTAATGG TAAACTATGTCCTTGTGGAAATCGTGGCTGTTTAGAACAGTATTGTTCAGAAAAAAAGGTATTTGAACAGCTTTCTTCTT TAGAAAATATTCCTAAAATAGATTCTGATATAGTAAAGCAACTATATTATGAAGATAACCAGAATGCCAAAAAAGTTATT CATGAGTTTTGTAGTTACTTAACAATAGCTATAAATAATGCTATTACAACTTATGCTCCTGAAATAATATATTTAAATAG CCAAATAATTAGTGATATCCCTGAGATATTACAGATTACAAAAGATATGTTAGTTAGCTCTTTTAACAAAGGAATAAATA TAGAAATTTCATCATTAGGGTCTGAGGCATCTCTATATGGTGGCTCTGCCGTAAATATCAAGAGCTTTTTGAATATACAA AATTTAACTTTAATTAATGAAATATAA Protein sequence : MQNNLLFLCKKYYNIILRRNIKLVTDKYTIREMNERLVLEQIIKNGPISRASIASTIGLNKATISAITKKLIDESLVHEI GIGNSTHSGGRKPILLVFNKCAGISLSMDIGYDYIFSSLSYLDGTIINSKKLTDIQVSKDNVIQLIDEIINSYNISKIDT PYKVIGLTLAIHGITCENKVLFTPYYNLNEIDLYSILSKKYDFPIHIENEANLTALAENTFSTVHNSLLSLSIHSGFGSG IIINNKLYSGRNGMSGEIGHTIIMPNGKLCPCGNRGCLEQYCSEKKVFEQLSSLENIPKIDSDIVKQLYYEDNQNAKKVI HEFCSYLTIAINNAITTYAPEIIYLNSQIISDIPEILQITKDMLVSSFNKGINIEISSLGSEASLYGGSAVNIKSFLNIQ NLTLINEI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0550 | NP_814320.1 | xylose repressor | Not tested | Not named | Protein | 5e-67 | 42 |
| ef0076 | AAM75280.1 | EF0076 | Not tested | Not named | Protein | 4e-67 | 42 |
