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Name : nrdE (CDR20291_2830) Accession : YP_003219308.1 Strain : Clostridium difficile R20291 Genome accession: NC_013316 Putative virulence/resistance : Unknown Product : ribonucleoside-diphosphate reductase subunit alpha Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0209 EC number : - Position : 3347860 - 3349959 bp Length : 2100 bp Strand : - Note : - DNA sequence : ATGAATTGGATAGAGCTTAACAATCAAGTGATAATTAAAAATGAACAAGGTAAGTACCAATTGGAAAAGGATAAGGAAGC CTTAAGTAGTTACATAGAAGAATTTATACAACCAAAGTTGAGAAAATTTAATAACCTAGAAGAAAGATTGAAGTATTTAA TAGATGAAGGTTATTATTTAAAAGAAGTAATAAATCAGTATAGCATAGATGTTATTAAAAATATATATGATATGATTGAT AAACATAAGTTTGAATTTCAATCATATATGAGTGCAAATAAGTTTTATCAAAATTATGCATTAAAGAGCAATGATGGAAA GGAAATATTAGAAACATATAATGATAAAGTGTTAATTGTAGCTTTGACACTAGGAAATGGCGATAAAGATTTAGCTTTAA ACTTGGCAGATAAAATAGTAAAACAAGAATTTCAACCAGCTACACCTACTTTTTTAAATGCTGGAAGAAAGAGGGCTGGA GAAATGGTATCATGTTTTTTACTATCTGTAGAAGATAGTACAGAAGGTATATCATATGCTATATCTTCATCAAATCACTT ATCAAAGATTGGTGGAGGAGTTGCACTAAATTTATCTAAACTTAGAGCATCTGGCGAATCTATCAAAGATATAGAAGGTG CAGCTGGAGGTGTTGTTGGAGTAGCTAAAATGTTAGAACAATCATTTAGTTACTTTAATCAAATGGGAGCTAGACAAGGT TCTGGTGCGGTGTACCTTACTGTATTCCATCCTGATTTTGAATTGTTGATGGATACTAAAAAGATAAATGCAGATGAAAA AATAAGACTTGCTACATTATCATTAGGAGCTATAATACCAGATAAATTTATGGAGTTGGCAGAAAAAAATGAAGTAGCAT ATGCATTTTATCCTCATACTGTGTATAAGAAATATGGAGTTTCTCTTGATGAGATAGAAATGGATGAGTGGTATGATAAA TTGGTTAATGATAGTGATATAAGAAAAAAAGAAATAAATCCTAGGCAGATGTTGACAAAAATAGCACAAATGCAACAAGA AAGTGGATATCCATATGTAGTGTACATAGATACAGCTAATAGAGAACATACATTAAAAGATGTTGGAATTATTAAAATGT CTAACTTATGTTGTGAGATATTTCAATATCAAACACCTTCAGAAATAGAGGGGTATGGAGGAAAAAATGAATGGGGACAA GATATAAGTTGTAACCTAGGTTCTTTAAACATAGCCAATGTAATGGATAATAAAACTATAGAAAGTACAGTTGAAACAGC AATAAGAGCACTGTCATTTGTAGCAGATAGCACAGATATAAAACCAGTGCCAACGGTAAGCAATAGTAACAGCAAGTCTC ATTCTATAGGATTAGGAGCTATGAATTTACATGGATACTTAGTAAGAGAAAATATTTTATATACTTCAGATGATGCTATA GATTTTTCTAATGTATTTTTTGCAATGGTTAGATACTATTCAATTAAAGCTTCTATGAAAATAGCCATAGAAAGAAATCA AACTTTTGAAGGATTTGATAAATCAGAATATGTTAAGGGAAGAAATAGCAAGGTTTTATCAAAATACTATGAACAATCTT ATCTACCTAAGTCAGAAAAGGTAAGAGCATTATTTGAAGGGATTTATATACCAACAAAAGAAGATTGGACAAAATTATTG GATGAAGTAAAAGAAAAAGGGATATATAATGCATATTTAATGGCAGTAGCACCAACTCAAAGCATTAGTTATGTTCAAAA TGCTACATCAAGTATAATGCCAATTACTGAGCCAGTAGAAGTAAGAACATATGGAGACTCTACTACAATATATCCAATGC CATTTTTAACAAATGATAATATGTTGTATTATCAATCAGCATACAGGATGGATATGAGAAAGGTCATAGATTTAGTGGCA ACAGTTCAAAACCATGTTGACCAAGGTATATCAACAACACTGTTTGTTACAGATGAAAAGACAACTAGAGATATAGCTAG ACATTACATATATGCCTATAAAAAAGGTTTGAAAAGTTTATATTACACAAGAACAAAGATGACAAGAGATACTCATGAGT GTCTAGTGTGTTCAGTATAG Protein sequence : MNWIELNNQVIIKNEQGKYQLEKDKEALSSYIEEFIQPKLRKFNNLEERLKYLIDEGYYLKEVINQYSIDVIKNIYDMID KHKFEFQSYMSANKFYQNYALKSNDGKEILETYNDKVLIVALTLGNGDKDLALNLADKIVKQEFQPATPTFLNAGRKRAG EMVSCFLLSVEDSTEGISYAISSSNHLSKIGGGVALNLSKLRASGESIKDIEGAAGGVVGVAKMLEQSFSYFNQMGARQG SGAVYLTVFHPDFELLMDTKKINADEKIRLATLSLGAIIPDKFMELAEKNEVAYAFYPHTVYKKYGVSLDEIEMDEWYDK LVNDSDIRKKEINPRQMLTKIAQMQQESGYPYVVYIDTANREHTLKDVGIIKMSNLCCEIFQYQTPSEIEGYGGKNEWGQ DISCNLGSLNIANVMDNKTIESTVETAIRALSFVADSTDIKPVPTVSNSNSKSHSIGLGAMNLHGYLVRENILYTSDDAI DFSNVFFAMVRYYSIKASMKIAIERNQTFEGFDKSEYVKGRNSKVLSKYYEQSYLPKSEKVRALFEGIYIPTKEDWTKLL DEVKEKGIYNAYLMAVAPTQSISYVQNATSSIMPITEPVEVRTYGDSTTIYPMPFLTNDNMLYYQSAYRMDMRKVIDLVA TVQNHVDQGISTTLFVTDEKTTRDIARHYIYAYKKGLKSLYYTRTKMTRDTHECLVCSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1481 | YP_001800875.1 | ribonucleotide-diphosphate reductase subunit alpha | Not tested | Not named | Protein | 2e-144 | 47 |
