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Name : CDR20291_2785 (CDR20291_2785) Accession : YP_003219264.1 Strain : Clostridium difficile R20291 Genome accession: NC_013316 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG3842 EC number : - Position : 3297551 - 3298540 bp Length : 990 bp Strand : - Note : - DNA sequence : ATGAGTTACTTAAAAATAAATAATGTGTTTAAAAGTTATGACCAAAAAAGGGTTTTAAATAATATTAGTTTGGATATTGA AGAAGGGGAATTTCTATGTTTACTCGGACCTAGTGGATGTGGTAAAACTACATTACTTAGAATAATAGCAGGTCTTGAAG ATGTAAATAGTGGAACTATAATTCTCCAGGATAAAGATATTACAAATTTAGAGCCATCAAAGAGAGGTTTTGGTATAGTA TTTCAATCATATGCATTATTTCCGAATATGACTGCTTATAACAATATAGCTTTTCCACTAAAAGAGAGAAAAGTTTCAAA AGAAAAAATAGATAATAAAGTTAAGGAAGTACTTGAAACAGTTGGATTGACTAATGAAGCTCATAAATATCCTAAAGCAT TATCAGGTGGGCAACAACAGAGGATTGCAATAGCAAGAGCATTAGCTCTTGAACCAAAGTTTTTACTTTTAGATGAACCA ATGTCCGCATTAGATGCAAAGGTTAGACACAAGCTTAGAATGGACATTAAAAGATTACAAAAAGAACTTAATATAACGAC AATAATGGTAACACATGACCAAGAAGAAGCTATAACTATGGCAGATAAAATAGCTATTCTAAATGGAGGAGATATAATGC AAATAGGGACTCCAGAAGAAATATACCAAAATCCTCAAAACCTATTTACAGCTCAATTTATAGGAGATACAAACTGTTTT GATAATGGAGATTCTATATTAACTGTAAGACCAGAATATGTTCAAATAGAGAAATCGACAAAAGAAAACTACCAAGGTAT AATATCAAATATAGAGTTTAGAGGGAATTTATTGAGAGTTGAAATAAAAGATAAATTAAATGAAAATTTCATAATAAGTG ATGTTTCTATAAAAGAGTGGGTTAATTTAAATTTAGTAGAAGGTGACCTTGTAAAAATAAGTATAGACGAAAAATACTAT TTAAAGTATCCAAAAGTTAAAGGAGCATAA Protein sequence : MSYLKINNVFKSYDQKRVLNNISLDIEEGEFLCLLGPSGCGKTTLLRIIAGLEDVNSGTIILQDKDITNLEPSKRGFGIV FQSYALFPNMTAYNNIAFPLKERKVSKEKIDNKVKEVLETVGLTNEAHKYPKALSGGQQQRIAIARALALEPKFLLLDEP MSALDAKVRHKLRMDIKRLQKELNITTIMVTHDQEEAITMADKIAILNGGDIMQIGTPEEIYQNPQNLFTAQFIGDTNCF DNGDSILTVRPEYVQIEKSTKENYQGIISNIEFRGNLLRVEIKDKLNENFIISDVSIKEWVNLNLVEGDLVKISIDEKYY LKYPKVKGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 2e-30 | 41 |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 1e-30 | 41 |
