Gene Information

Name : fhuC (CDR20291_2771)
Accession : YP_003219250.1
Strain : Clostridium difficile R20291
Genome accession: NC_013316
Putative virulence/resistance : Virulence
Product : ferrichrome ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 3282864 - 3283646 bp
Length : 783 bp
Strand : -
Note : -

DNA sequence : 
ATGAACTGTATAAATACTAAGAATCTAAATGTATCATATGGAAACACAGATATTATAAAAAATTTAAATTTAAATATACC
AAAAGGAAAAATAACTACCATCATAGGGGCTAATGGTTGTGGAAAATCGACAATACTTAAAACTATAGGTAGAATTATTA
GCCCTAATAGTGGGAAAATATATATAAATGGAGAGGACATCTACAAAAAGAAGTCTAAAGAAATAGCAAAGGATATGGCT
GTACTTCCACAAAGCCCTCAAGCTCCTAGTGGTCTTACCGTTTCAGAATTAATTTCTTATGGAAGATTTCCTCATAAAAG
TGGATTTGGTAATTCTAGTAAAGAAGACAGAGAGATTGTAAATTGGAGTTTAGAAGTTACTGGAATTGCAGAATTTAAGG
ATAGAAATATGGAAGATTTATCAGGAGGACAAAGACAAAGGGCATGGATAGCTATGGCTTTGGCACAAGAAACTGATATA
TTATTACTGGATGAGCCTACAACATATTTAGATTTGGCACATCAATTAGAGATACTAAAATTATTAGATGAACTAAATAA
AAAACAAGGAAGAACTATTGTCATGGTAATACATGAACTTAATAATGCAGCAAGATTTGCTGACCACATGATAGGTATTA
AGAAAGGTAAAATAGTTTGTGAAGGTGATGCATATGATGTTATGACGAAGGATAATCTAAAAGAATTATTTAATATTGAT
GCAGAAATAGCAACAGACCCAAGAACAAATAAACCAATTTGTATAACTTATGACATGGTGTAA

Protein sequence : 
MNCINTKNLNVSYGNTDIIKNLNLNIPKGKITTIIGANGCGKSTILKTIGRIISPNSGKIYINGEDIYKKKSKEIAKDMA
VLPQSPQAPSGLTVSELISYGRFPHKSGFGNSSKEDREIVNWSLEVTGIAEFKDRNMEDLSGGQRQRAWIAMALAQETDI
LLLDEPTTYLDLAHQLEILKLLDELNKKQGRTIVMVIHELNNAARFADHMIGIKKGKIVCEGDAYDVMTKDNLKELFNID
AEIATDPRTNKPICITYDMV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-55 47
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-55 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-56 45
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-52 45
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 3e-52 45
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 3e-52 45
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-52 45
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-55 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-53 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-53 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-53 43
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-53 43
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-55 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fhuC YP_003219250.1 ferrichrome ABC transporter ATP-binding protein BAC0164 Protein 3e-55 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fhuC YP_003219250.1 ferrichrome ABC transporter ATP-binding protein VFG1042 Protein 2e-55 43
fhuC YP_003219250.1 ferrichrome ABC transporter ATP-binding protein VFG0925 Protein 2e-55 43