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Name : CDR20291_2709 (CDR20291_2709) Accession : YP_003219188.1 Strain : Clostridium difficile R20291 Genome accession: NC_013316 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 3202660 - 3203487 bp Length : 828 bp Strand : - Note : - DNA sequence : ATGTCTAGGAAGTATAGTATTTCTAGTATGTGTAAGTTGATAGGTGTGTCAAGAAGCGGTTACTATAAATGGCTAAGTTA TTCTAAAAAATCTTCCGATAGGGGTATCAAAGATAGAATTATTAAGGATTATATAATTGAAATACATAAAAAATATAGAG GAACTTACGGTAGAAAAAGAATTTGTACTTATTTAAATAAAATACTTGATAGCCCTATTAATCATAAGAAAGTATATAGG TTGATGAAAGAACTAGGAATTAAATCTATTATTAGAAAGAAAGTATATAGACGTAAGTTTAAATCATATGAGGTATATGA TAATATATTAAATCGTGAATTTAGAGCTAATCAACCATTAGAAAAAATTTGTATGGATATAACATACATACCTATCGGTA AAAAATTCTTATACATGAATGTAGCCAAAGATTTATTTAATGGTGAAATAGTGGCATATGAGATAAGTACAAAAATGGAT ACTAAATTAGTTAATAAAACAGTAAATCAACTAATAAATATGAATTTAGCTAAAGATTGTATTTTACATACAGATCAAGG TTCACAATATACAAGTAGATCTTACTCTAAAAGGCTTAAAGATAATGGTATTATACAATCTATGTCCCGAAGGGGCAACT GCTGGGATAATGCTCCTATAGAAAGTTTTTTCAGTCATTTTAAATCTGAATTAATATATTTAATTGATACTACAGATCCA AAGGAAATGATTAGTCTAATAAATGATTATATTTATTTTTATAATAATGAAAGAATACAATTAAAAAATGGAATGAGTCC GATTGAATATCGAACTCATTCCGCATAA Protein sequence : MSRKYSISSMCKLIGVSRSGYYKWLSYSKKSSDRGIKDRIIKDYIIEIHKKYRGTYGRKRICTYLNKILDSPINHKKVYR LMKELGIKSIIRKKVYRRKFKSYEVYDNILNREFRANQPLEKICMDITYIPIGKKFLYMNVAKDLFNGEIVAYEISTKMD TKLVNKTVNQLINMNLAKDCILHTDQGSQYTSRSYSKRLKDNGIIQSMSRRGNCWDNAPIESFFSHFKSELIYLIDTTDP KEMISLINDYIYFYNNERIQLKNGMSPIEYRTHSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0101 | NP_763656.1 | transposase | Not tested | SCCpbp4 | Protein | 9e-28 | 46 |
| tnp | BAG06206.2 | transposase for ISSau4-like | Not tested | Type-VII SCCmec | Protein | 5e-33 | 43 |
| EFAU085_00737 | YP_008394261.1 | ISEnfa3, transposase | Not tested | Not named | Protein | 6e-31 | 43 |
