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Name : secA2 (CDR20291_2681) Accession : YP_003219160.1 Strain : Clostridium difficile R20291 Genome accession: NC_013316 Putative virulence/resistance : Unknown Product : preprotein translocase SecA subunit Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0653 EC number : - Position : 3159590 - 3161935 bp Length : 2346 bp Strand : - Note : - DNA sequence : ATGTCAGTTTTAGATGCAATCTTAGATAAAGCGGATGAACAAGAAATTAAAAAATTAAATTTAATAGTAGATAAAATAGA ATCTTTAGAAAAAGATATGGAAATCAAAGAGAATGAACAATTAAAAGAAATGACAAATACTTTTAGACTTAGATTAGACA AAGGTGAAAGTTTGGATGATATACTTCCAGAAGCATTTGCTGTTGTTAGAGAGGTCTCAAAAAGAGTTTTAGGAATGCGT CAATATAAAGTTCAGTTAATTGGAGGTATAGTAATTCATCAAGGAAAGATAGCTGAGATGAAGACTGGTGAGGGGAAAAC TTTAGTTGAGGTAGCTCCAGTATATCTAAATGCTTTAACAGGAAAAGGTGTACATGTAATTACAGTAAATGATTATTTGG CAGAACGTGATAAAGAACTTATGCGTCCAGTATATGAATTTTTAGGATTGACTGTAGGTGTAATTTTATCTAACCAAGAC CCAAGTATAAGAAAAGAACAATATAAATGTGATATAACTTATGGAACAAATAGTGAATTTGGATTTGACTATTTAAGAGA TAATATGGTGCCAGATTTGTCTCATAAAGTACAAAGGGAACTAAACTTTGCCATAGTAGATGAGATAGACTCAATATTAA TAGATGAAGCTAGAACTCCACTTATTATTGCAGGAGATGGTGATGAAGATTTAAAACTTTATGAGTTAGCAAATAACTTT GTAAAAACTGTTAAAGAAGAAGACTTTGAGATGGATAGAAAAGATAAAACTATAGCATTAACAGCAAGTGGTATAAGCAA AGCTGAGTCATTTTTTGGTATAACAAACCTTACTGATATAAAGAATATAGAATTATATCATCATATAAATCAAGCTTTAA GAGGTCATAAGCTTATGGAAAAAGATGTTGACTATGTTATCTCAAATGGAGAAGTAATGATAGTTGACGAATTTACAGGA AGAGTAATGGATGGTAGAAGATATACAGATGGACTTCACCAAGCTATAGAAGCCAAAGAAGGTGTTGAGATAAAGAATGA ATCTAAAACTATGGCTACTGTGACTTATCAAAATTTCTTCAGACTATATGAAAAACTTTCTGGTATGACTGGTACTGCAA AGACAGAAGAAGGGGAATTTGAGTCAATCTATAAATTAAATGTTGTCCAAATACCAACTAATAGACCAGTTATTAGAGCT GATTTGCATGATAAGGTATTTAAAACAGAAGAAGAAAAGTATAGTGCTGTTGTAGAAGAAATAATAAGGATACATAAGAC TAGACAGCCAATACTCGTGGGAACAGTTTCTGTTGAAAAATCTGAGAAGTTATCTAAAATGCTTAAGAAGCAAGGTATTA AGCATCAAGTCTTAAATGCTAAACAACATGATAAAGAGGCAGAGGTAATTTCTAAAGCTGGTAAATTAGATGCTATAACG ATTGCTACAAATATGGCAGGTAGAGGTACGGATATTTCTCTAGGTGCAGGAGATAAAGAAGAAGAAGAAAAAGTTAAAAA TTTAGGTGGTCTTTATGTTATAGGAACAGAAAGACACGAATCAAGAAGAATTGACAATCAGCTTAGAGGGCGTTCTGGTC GTCAAGGAGACCCAGGTACATCAAGATTTTTTGTAAGTCTTGAAGATGATGTAATAAAGCTTTATGGTGGAAAAACTATA GAGAAACTTATGAAGAGAACAAGTTCAAAGGAAAATACGGCTATTGAAAGTAAAGCACTTACAAGGGCTATAGAAAGAGC ACAAAAAGGTGTAGAAGGTAAGAATTTTGAAATAAGAAAAAATGTTCTTAAATATGATGATACTATTAATGAGCAAAGAA AGGTTATATATAATGAAAGAAATAAAGTGTTAAATGATGAAGATATAAAAGAAGATATTCAAAAAATGGTTAAAGACATC ATACAAGAAGCAGGAGAAACTTATTTAATTGGAAGAAAAAGAGATTATTATGGATATTTTAAACATTTATATAGTACATT TATGCCTGCAGATACATTACTAATACCCGGTGTAGATAAAAAAAGTGTCCAAGAGATAATTGATAGCACATATGAAATTT CAAAAAGGGTTTATGACTTGAAAAAGATGATGATTGGTATTGATAAAGTTGCGGAGTTAGAAAAAACAGTACTTTTAAAA GTGGTTGATCAATACTGGATAGATCATATAGATGCTATGGAACAGTTAAGACAGTATATAGGTCTTAAATCTTATGCTCA AAAAGATCCGTTTAAAGAATATGCTTTAGAAGGATATGATATGTTTGAAGCTTTAAATAAAAATATAAGGGAAGCAACAG TACAATACTTATATAAATTTAACTAA Protein sequence : MSVLDAILDKADEQEIKKLNLIVDKIESLEKDMEIKENEQLKEMTNTFRLRLDKGESLDDILPEAFAVVREVSKRVLGMR QYKVQLIGGIVIHQGKIAEMKTGEGKTLVEVAPVYLNALTGKGVHVITVNDYLAERDKELMRPVYEFLGLTVGVILSNQD PSIRKEQYKCDITYGTNSEFGFDYLRDNMVPDLSHKVQRELNFAIVDEIDSILIDEARTPLIIAGDGDEDLKLYELANNF VKTVKEEDFEMDRKDKTIALTASGISKAESFFGITNLTDIKNIELYHHINQALRGHKLMEKDVDYVISNGEVMIVDEFTG RVMDGRRYTDGLHQAIEAKEGVEIKNESKTMATVTYQNFFRLYEKLSGMTGTAKTEEGEFESIYKLNVVQIPTNRPVIRA DLHDKVFKTEEEKYSAVVEEIIRIHKTRQPILVGTVSVEKSEKLSKMLKKQGIKHQVLNAKQHDKEAEVISKAGKLDAIT IATNMAGRGTDISLGAGDKEEEEKVKNLGGLYVIGTERHESRRIDNQLRGRSGRQGDPGTSRFFVSLEDDVIKLYGGKTI EKLMKRTSSKENTAIESKALTRAIERAQKGVEGKNFEIRKNVLKYDDTINEQRKVIYNERNKVLNDEDIKEDIQKMVKDI IQEAGETYLIGRKRDYYGYFKHLYSTFMPADTLLIPGVDKKSVQEIIDSTYEISKRVYDLKKMMIGIDKVAELEKTVLLK VVDQYWIDHIDAMEQLRQYIGLKSYAQKDPFKEYALEGYDMFEALNKNIREATVQYLYKFN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secA2 | YP_006310687.1 | preprotein translocase subunit SecA2 | Not tested | FWisland_3 | Protein | 8e-133 | 41 |
