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Name : CDR20291_2526 (CDR20291_2526) Accession : YP_003219006.1 Strain : Clostridium difficile R20291 Genome accession: NC_013316 Putative virulence/resistance : Virulence Product : two-component response regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 2963027 - 2963719 bp Length : 693 bp Strand : - Note : - DNA sequence : ATGAATACTAAAGTGCTTGTTATAGACGATGAAATGCATATAGTTGAGCTATTAAAATTCAATTTGGAGGTGTCAAATTA CGAAGTTAGTTATTCATATGATGGATTTGACGGATTTATAAAGGCTAAGGAAATTAAACCAGATTTAATACTTTTAGATT GGATGTTACCAAATATAAGTGGAATAGAAGTTTTGAGAAAAATAAGAAGTGATAAGGACTTAAAAAATATTCCTGTTATA ATGCTTACTGCTAAAAATATGGAAAATGACAAGGTTGAAGGGCTTGAAATAGGTGCTGATGACTATATAACTAAGCCATT TAGTATAAAAGAGTTGTTAGCTAGGATTAGTTCTGTTTTAAGGAGATATAATTTGACTAGCTTAGGTGAAGAAAACAATA TACTTACTACAGGCAATTTAAAACTAGATTTATCAAAACATGAAGTTACCAAAGGCTCTGAAAAGATAGAGTTAACTCTT AAGGAATTTGAATTGTTAAAATTATTAATTCAAAATAAAGGAAAAGTACTTTCAAGAAATTATCTTTTGGATAAAATATG GGGGTATGAATACTATGGAGAAACTAGAACAGTAGATGTTCATATAAGATATTTAAGAAAAAAAATAGAAGATGAAGATA AATCGGAAAAATATATAGAGACTATAAGAGGTGTAGGGTATAAAATAGATTAA Protein sequence : MNTKVLVIDDEMHIVELLKFNLEVSNYEVSYSYDGFDGFIKAKEIKPDLILLDWMLPNISGIEVLRKIRSDKDLKNIPVI MLTAKNMENDKVEGLEIGADDYITKPFSIKELLARISSVLRRYNLTSLGEENNILTTGNLKLDLSKHEVTKGSEKIELTL KEFELLKLLIQNKGKVLSRNYLLDKIWGYEYYGETRTVDVHIRYLRKKIEDEDKSEKYIETIRGVGYKID |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vanRB | YP_001698483.1 | regulatory protein | Not tested | Not named | Protein | 6e-23 | 43 |
| copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 1e-26 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CDR20291_2526 | YP_003219006.1 | two-component response regulator | HE999704.1.gene2815. | Protein | 2e-40 | 51 |
| CDR20291_2526 | YP_003219006.1 | two-component response regulator | NC_002952.2859905.p0 | Protein | 4e-42 | 49 |
| CDR20291_2526 | YP_003219006.1 | two-component response regulator | NC_002745.1124361.p0 | Protein | 5e-42 | 49 |
| CDR20291_2526 | YP_003219006.1 | two-component response regulator | NC_009782.5559369.p0 | Protein | 5e-42 | 49 |
| CDR20291_2526 | YP_003219006.1 | two-component response regulator | NC_002951.3237708.p0 | Protein | 5e-42 | 49 |
| CDR20291_2526 | YP_003219006.1 | two-component response regulator | NC_003923.1003749.p0 | Protein | 5e-42 | 49 |
| CDR20291_2526 | YP_003219006.1 | two-component response regulator | NC_002758.1121668.p0 | Protein | 5e-42 | 49 |
| CDR20291_2526 | YP_003219006.1 | two-component response regulator | NC_007622.3794472.p0 | Protein | 4e-42 | 49 |
| CDR20291_2526 | YP_003219006.1 | two-component response regulator | NC_009641.5332272.p0 | Protein | 5e-42 | 49 |
| CDR20291_2526 | YP_003219006.1 | two-component response regulator | NC_013450.8614421.p0 | Protein | 5e-42 | 49 |
| CDR20291_2526 | YP_003219006.1 | two-component response regulator | NC_007793.3914279.p0 | Protein | 5e-42 | 49 |
| CDR20291_2526 | YP_003219006.1 | two-component response regulator | NC_002758.1121390.p0 | Protein | 2e-31 | 46 |
| CDR20291_2526 | YP_003219006.1 | two-component response regulator | NC_010079.5776364.p0 | Protein | 2e-31 | 46 |
| CDR20291_2526 | YP_003219006.1 | two-component response regulator | NC_002952.2859858.p0 | Protein | 2e-31 | 46 |
| CDR20291_2526 | YP_003219006.1 | two-component response regulator | NC_007622.3794948.p0 | Protein | 2e-31 | 46 |
| CDR20291_2526 | YP_003219006.1 | two-component response regulator | NC_003923.1003417.p0 | Protein | 2e-31 | 46 |
| CDR20291_2526 | YP_003219006.1 | two-component response regulator | NC_013450.8614146.p0 | Protein | 2e-31 | 46 |
| CDR20291_2526 | YP_003219006.1 | two-component response regulator | NC_002951.3238224.p0 | Protein | 2e-31 | 46 |
| CDR20291_2526 | YP_003219006.1 | two-component response regulator | NC_007793.3914065.p0 | Protein | 2e-31 | 46 |
| CDR20291_2526 | YP_003219006.1 | two-component response regulator | AE016830.1.gene1681. | Protein | 4e-35 | 46 |
| CDR20291_2526 | YP_003219006.1 | two-component response regulator | NC_012469.1.7686381. | Protein | 2e-33 | 45 |
| CDR20291_2526 | YP_003219006.1 | two-component response regulator | AE015929.1.gene1106. | Protein | 3e-25 | 44 |
| CDR20291_2526 | YP_003219006.1 | two-component response regulator | HE999704.1.gene1528. | Protein | 9e-28 | 44 |
| CDR20291_2526 | YP_003219006.1 | two-component response regulator | NC_012469.1.7685629. | Protein | 1e-36 | 43 |
| CDR20291_2526 | YP_003219006.1 | two-component response regulator | NC_005054.2598277.p0 | Protein | 3e-32 | 42 |
| CDR20291_2526 | YP_003219006.1 | two-component response regulator | BAC0125 | Protein | 1e-25 | 42 |
| CDR20291_2526 | YP_003219006.1 | two-component response regulator | NC_014475.1.orf0.gen | Protein | 3e-32 | 42 |
| CDR20291_2526 | YP_003219006.1 | two-component response regulator | AF155139.2.orf0.gene | Protein | 2e-28 | 42 |
| CDR20291_2526 | YP_003219006.1 | two-component response regulator | AE000516.2.gene3505. | Protein | 4e-32 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CDR20291_2526 | YP_003219006.1 | two-component response regulator | VFG0596 | Protein | 5e-27 | 41 |
