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Name : recG (CDR20291_2445) Accession : YP_003218925.1 Strain : Clostridium difficile R20291 Genome accession: NC_013316 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 2866395 - 2868464 bp Length : 2070 bp Strand : - Note : catalyzes branch migration in Holliday junction intermediates DNA sequence : GTGATATATTTGTTGGATTTATATAAAGATGTTCAATATGTTAAGGGAATAGGACCTAAAAAAGCAGATAAATTAAATAA ACTGGGTATATTTACACTAAAAGACCTATTGTATTATTTTCCAAGACAATTTGAAGATAGAAATAATCTAAAGAAAATAG CACAATTAGAAGATGGTGAGAAAGTTACGATAAAAGCAGTAATATCAAGTATAAATACATTTAGCCCAAAAGAAGGTATG ACTTTAACAAAGATTGATGTAAAAGATGAGACAGGCTCGGCTAAATTAGTGTTTTTTAATAAAAGTTATATAAAAAATAC TTTTCGTCCAGGAGATTCAATATTAGTTTTTGGGAAGGTTAAGAAAAAATTTAATAACTTAGAACTTACATCATGTGAAT TAGAATATCTTACTAATTCACCTAAGAATACATGTAGATTTATGCCTGTGTACCAGCTTACATACGGTGTTACAAATAAA GAAATTATGAGTATAATTAGAACAGTACTTGAAGATAAAGAATTAATTATACAAGAATATATGCCACAAAGAATTATAGA AAAATATAGGCTATGTAGTATAGATTTTGCAGTTAGAAACATACATTCACCAAGTAGTAAGGAATCATTAAAAATAGCTT TATATAGAATTGTATTTGAAGAATTACTTATACTACAACTAGGGTTGTTTGTATTTAAAAGTGGCAGAAATAAAGAAGAT GGAATAAAGTTTGAAACAAGTAAAGACTTAAAAAAAATAATAAGTGCTTTACCATTTAAACTGACTAAAGCTCAAAACAG GGCATTAGATGAAATTATACAAGATATGAATTTAGAGAAAATAATGAATAGATTGGTACAAGGTGATGTAGGGAGTGGTA AAACAGTAGTAGCTCTCTTAGCACTTGCAAATTGTGTTTTAAATGGTTATCAGGGCGCTTTGATGGCACCTACAGAGATA TTAGCAGGGCAACATTACATTTCACTTACTGAGTCTCTAAAAGATTTTGGAATAAATGTAGGTCTATTAATAGGTAGTCT TACAAAAAAACAAAAGGATACAGTATTGGAACAAATAAGGAATAATGAGATTGATATATTAATAGGTACACATGCACTAA TTGAAGATAAGGTTGAATTTAATAATATTGGTTTAGTTATAACAGATGAACAGCATAGATTTGGTGTTATGCAAAGGAGC AAACTTTCATTGAAAGGAGCAAATCCTGATATATTAGTAATGACAGCAACACCAATACCAAGAACTTTAGCACTTATACT CTATGGAGATTTAGATATTTCTATTATAGATGAACTTCCTCCAGGAAGACAGCCAATAGAAACAATTGCTATTGAAAAAA GTAAGCGAGATAGAGCATATAATAACCTTGTAAGAAGAGAGGTTGAATCAGGAAGACAAGTGTACATTGTATGTCCTTTG GTAGAAGAAAGTGAAGCTATAGAAGCTAAATCAGCAGTTGAACTTGTAGAGGAATTAAGAGCTGAATATTTCCACGATTT AAGGCTTGGATTGCTTCATGGTAAAATGAAATCGAGTGAAAAAGACGAAGTAATGGAACGTTTTAAAAATAAAGAAATAG ATATTTTAGTTTCAACAACAGTTATAGAAGTTGGTGTCAATGTCCCAAATGCAACATTAATGATAATAGAAAATGCAGAA AGATTTGGACTTGCACAATTACATCAGCTTAGAGGGCGAGTTGGAAGAGGTAGTCATAAATCGTATTGTGTACTAATTTA TGATTCTAAAACAGATGTATGTAGACAAAGAATGGCTATAATGGAAGAGACCAATGATGGTTTTAAGATTTCAGAGAAGG ATTTAGAAATAAGAGGACCTGGAGAATTTTTTGGGACAAGGCAACATGGTCTTCCAGAACTTAAAGTAGCAAACTTATTT AAACATATAAAAATATTGAAGTTAGCACAACAAGAAGCTCGATATATATTGGGTGAAGATAATAATCTACAATTGAAAGA AAACATGGCACTCAAAAAAGAAATTATAGATAAATTTAAAGATACATTGAAAGAAATTTCATTAAATTAA Protein sequence : MIYLLDLYKDVQYVKGIGPKKADKLNKLGIFTLKDLLYYFPRQFEDRNNLKKIAQLEDGEKVTIKAVISSINTFSPKEGM TLTKIDVKDETGSAKLVFFNKSYIKNTFRPGDSILVFGKVKKKFNNLELTSCELEYLTNSPKNTCRFMPVYQLTYGVTNK EIMSIIRTVLEDKELIIQEYMPQRIIEKYRLCSIDFAVRNIHSPSSKESLKIALYRIVFEELLILQLGLFVFKSGRNKED GIKFETSKDLKKIISALPFKLTKAQNRALDEIIQDMNLEKIMNRLVQGDVGSGKTVVALLALANCVLNGYQGALMAPTEI LAGQHYISLTESLKDFGINVGLLIGSLTKKQKDTVLEQIRNNEIDILIGTHALIEDKVEFNNIGLVITDEQHRFGVMQRS KLSLKGANPDILVMTATPIPRTLALILYGDLDISIIDELPPGRQPIETIAIEKSKRDRAYNNLVRREVESGRQVYIVCPL VEESEAIEAKSAVELVEELRAEYFHDLRLGLLHGKMKSSEKDEVMERFKNKEIDILVSTTVIEVGVNVPNATLMIIENAE RFGLAQLHQLRGRVGRGSHKSYCVLIYDSKTDVCRQRMAIMEETNDGFKISEKDLEIRGPGEFFGTRQHGLPELKVANLF KHIKILKLAQQEARYILGEDNNLQLKENMALKKEIIDKFKDTLKEISLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 8e-97 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| recG | YP_003218925.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 2e-111 | 41 |
