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Name : araD (CDR20291_2176) Accession : YP_003218662.1 Strain : Clostridium difficile R20291 Genome accession: NC_013316 Putative virulence/resistance : Unknown Product : L-ribulose-5-phosphate 4-epimerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0235 EC number : - Position : 2559426 - 2560112 bp Length : 687 bp Strand : - Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source DNA sequence : GTGCTAGAAATTTTAAAAGAAGAAGTATTAAAAGCAAACTTAGAATTACCTAAGAAAAAGCTAATTACTTATACTTGGGG AAATGTAAGTGGGATAGATAGAGAAAAAGGATTAGTGGTGATAAAACCAAGTGGTGTAGAGTATAGTAATATGACTGTAG AAGATATGGTTGTAGTTGATTTAGAGGGAAATGTAGTTGATGGCAAACTAAGACCCTCCTCAGATACTCCGACTCATCTA GTTTTATATAAAGAGTTTGAAGAATTGGGGGGAATAGTACATACACATTCAAGTTGGGCAACAATTTGGGCTCAAATAGG AAAATCTATACCATCTTGTGGTACTACTCATGCAGATTATTTTTATGGAAGCATACCATGTACCAGAAAAATGACTAGAG AAGAAATTTGCAATGAATACGAAAAGGAAACTGGAAATGTAATCATTGAAGAATTTATGGGAAGAAATCCAATTCATTGT CCAGGAATAATTGTAAATGACCACGGACCTTTTACATGGGGAAAAGATGCAAATGAGGCTGTACACAATGCAGTAGTTTT AGAAGAAGTCGCAAAGATGGCTTATTATACAGAGTTAATGAGTCCTGATAATATTATGGATAAGGTTCTTATGAATAAGC ATTTTTCAAGAAAACATGGAAAAAATGCATACTATGGTCAAAAATGA Protein sequence : MLEILKEEVLKANLELPKKKLITYTWGNVSGIDREKGLVVIKPSGVEYSNMTVEDMVVVDLEGNVVDGKLRPSSDTPTHL VLYKEFEELGGIVHTHSSWATIWAQIGKSIPSCGTTHADYFYGSIPCTRKMTREEICNEYEKETGNVIIEEFMGRNPIHC PGIIVNDHGPFTWGKDANEAVHNAVVLEEVAKMAYYTELMSPDNIMDKVLMNKHFSRKHGKNAYYGQK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| araD | YP_281517.1 | L-ribulose-5-phosphate 4-epimerase | Not tested | Not named | Protein | 3e-58 | 57 |
