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Name : CDR20291_2096 (CDR20291_2096) Accession : YP_003218583.1 Strain : Clostridium difficile R20291 Genome accession: NC_013316 Putative virulence/resistance : Unknown Product : cyclomaltodextrinase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 2458086 - 2459969 bp Length : 1884 bp Strand : - Note : - DNA sequence : ATGTTTAATAAAAATAAAGAAAATATAACTTTAAGTAATCAAATCAAAGGAACAATTCAAAATAGTTTAACAAAAGAAGC TATATTACATATACCAATGAGCAATTATGCCTATGGTTATGATAGAGAAACACTACATATAAGACTTAGAACTAAAAAAA ATGAAGCGAAAAGAGTAATTTTACGAATAGGAGACCAATATGTGTGGGATAAAGGAGGTGCAGGAGGAGGAAATTTAAAT GCATCTGGAGTTGGTTGGTCTGGTGGAACAAATATAGTAATGAGTAAAGAAGTAGAAACTGAATTATTTGACTATTGGAT AGCTAAGTGTAAGCCTTTAAATAAACGCTCACGATATGGTTTTATAATAGAAGGTCAAGAAGAAAAACTTTTATTTACAG AAAAAAGAATAATAGAGTTGGGAAATGAAAATGATGAAAAGGAATTATGTGAAATAGGTAATTTTTTTGGATATCCATAT TTAAATTATATAGATATACCTAAAGTGCCAAATTGGGTGAAAGATACTGTTTGGTATCAGATATTTCCAGATAGATTTGC AAATGGTGACCCGTCTATAAACCCAGAAGGAGTAGATAAATGGGGAGCTATTCCAACCAGAGATAATTTTACAGGTGGAG ATTTACAAGGTGTGATAGAACACTTAGATTATTTGAGTGATTTGGGAATAAACGGAATTTACTTTTGCCCTATTACAATT GGAAAAACCAATCATAGATATGATACGGTAGATTATATGGAGGTAGACCCTACATTAGGAGATAAAGAGACTTTAAAAAA ACTAATAGAAGAAGCGCATAAGAGAAATATAAAAATAATGTTGGATGCTGTTTTTAATCATATAGGATATTATTCTAAAC AGTGGCAAGATGTAGTTCAAAATAAGGAAAATTCTCGATATAAAAACTGGTTTTATATAAAAGATATGAGTAAAATTGAT ACTCCAATAGAACAGATAGATGAAAAAAATATACCTTATGAAACCTTTGGGTGTGAAAAATATATGCCTAAACTTAATAC AGAAAATTCAGAAGTAATAAAATATTTATTGGATGTAGGCAAGTACTGGATACAGGAATTTGATATAGATGCGTGGAGAT TAGATGTTTCAAATGAAGTAGACCATGTTTTTTGGAGAAAGTTTAGAGAAGAAGTCAAAAAAGTAAAACCAGACATTTAT ATATTGGGAGAAATTTGGCATGGTAGTTTACCATGGCTAATGGGTGACCAATTTGATTCAGTTATGAATTACTTGATGTC AGAAGCCATGAAAAAATTCTTTTGTACAGATGAGATAAACGCCGAAGAATTTAAGTATATGATAAATGATGTAATGGTAA GTTATCCAATACAAGTTAGTGAAGTTATTTTTAATTTACTTGGAAGTCACGATACTACAAGAATATTGACTTATGCTAAT GGAAATATTGATAGATTTAAACTTGCATATATGTTTATGTTTGTACAAACAGGATGTCCTTGTATATACTATGGTGATGA AATCGGAATGGAAGGAGAATTAAGTTCAATATCTGAAGGTCAAAGAAAATGTATGGAATGGAATGAAGAAAAATGGAATA AGGATATATTTGATTTTATGAAGAAGATTATTAGACTTCGTAAAGAAAATAAAGAACTTAGGTCTATATCAAATGAATGG GTGTTAGCAGATAAGGAAAATGGAACGATTATATTGAAAAAAGAATCTATTTCTATAATAATAAATAATTCATCTAAAAA TATAATTTTGACGTTACCAGATTATTTAGCAAATAAAAAAGTAAAAGATTTATATGAAGAAGAAATAGTTGATTTAAAAG AAGAACTAATGTTAGAGAAATACAAGTTCATTATTTTAAAATAA Protein sequence : MFNKNKENITLSNQIKGTIQNSLTKEAILHIPMSNYAYGYDRETLHIRLRTKKNEAKRVILRIGDQYVWDKGGAGGGNLN ASGVGWSGGTNIVMSKEVETELFDYWIAKCKPLNKRSRYGFIIEGQEEKLLFTEKRIIELGNENDEKELCEIGNFFGYPY LNYIDIPKVPNWVKDTVWYQIFPDRFANGDPSINPEGVDKWGAIPTRDNFTGGDLQGVIEHLDYLSDLGINGIYFCPITI GKTNHRYDTVDYMEVDPTLGDKETLKKLIEEAHKRNIKIMLDAVFNHIGYYSKQWQDVVQNKENSRYKNWFYIKDMSKID TPIEQIDEKNIPYETFGCEKYMPKLNTENSEVIKYLLDVGKYWIQEFDIDAWRLDVSNEVDHVFWRKFREEVKKVKPDIY ILGEIWHGSLPWLMGDQFDSVMNYLMSEAMKKFFCTDEINAEEFKYMINDVMVSYPIQVSEVIFNLLGSHDTTRILTYAN GNIDRFKLAYMFMFVQTGCPCIYYGDEIGMEGELSSISEGQRKCMEWNEEKWNKDIFDFMKKIIRLRKENKELRSISNEW VLADKENGTIILKKESISIIINNSSKNIILTLPDYLANKKVKDLYEEEIVDLKEELMLEKYKFIILK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SPN23F_09660 | YP_002510949.1 | alpha-amylase | Not tested | PPI-1 | Protein | 1e-112 | 46 |
