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Name : CDR20291_1906 (CDR20291_1906) Accession : YP_003218393.1 Strain : Clostridium difficile R20291 Genome accession: NC_013316 Putative virulence/resistance : Unknown Product : transposase-like protein b Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0675 EC number : - Position : 2226030 - 2227148 bp Length : 1119 bp Strand : + Note : - DNA sequence : GTGATAGCAGTGAAAAAAGCTTATAAGTTTAGAATATATCCAAATAAAAAACAACAAGAGTTAATTAACAAAACTTTTGG ATGTTGTAGATTTGTATATAATAAATATCTTGCTAAAAGAATAGATGTTTATAAAAACGATAAAGAAACTTTTACTTATA AACAGTGTAGTTCTGATTTGACCAATTTAAAAAAAGAATTAAATTGGCTTAAAGAACCTGATAAATTTTCACTACAAAAC GCCTTAAAAGATTTAGAAAACGCATATAATAAATTCTTTAAAGAAAAAGCAGGATTTCCTAAATTTAAATCAAAGAAAAC TAATAGATTTTCATATAAAACTAACTTTACAAATGGAAATATCGTGTATTGTGGTCAACATATAAAACTACCTAAACTTG GTATGGTTAAGATAAGGGATAAACAAGTACCTAAAGGGAGAATACTTAATGCTACTATATCTAAAGAACCAAGTGGTAGA TATTATGTATCATTATGCTGTACTGATGTAGATATTGAAGTATTTGAAAATACTAATAATCAGATAGGTTTAGATTTAGG AATTAAAGAATTTTGTATCTCAAGTTGTGGAGACTTTATAGAAAATCCTAAGTATCTTAAGAAGTCATTAAACAAACTTG CTAAATTACAAAGCGAATTATCGAGAAAAACAATCGGTAGTTTAAATAGAAACAAAGCAAGATTAAAAGTTGCAAGACTT CAAGAACATATAGCTAATCAAAGAAAGGATTTTCTACAAAAACTATCTACTAAATTAATAAAAGAGAATGATATTATTTG CATAGAAGATTTACAAGTAAAGAATATGATTAAAAATCATAAACTATCTCGCTCAATTTCAGATGTATCATGGTCAGAAT TTATTCGTCAATTAGAGTACAAGGCTAATTGGTATGGTAGAAAAATTGTAAAGGTAGGTAAATTCTTTGCAAGTTCACAA ATATGCAATAAATGTGGGTATAAAAACGAGGAAGTGAAGGACTTAAGTATAAGAGAATGGATTTGTCCTAGTTGTAATGA AACTCACGATAGAGATATAAATGCAAGTATAAATATATTAAAAGAAGGATTAAGACTAATAACAATTCAAAATAAATAA Protein sequence : MIAVKKAYKFRIYPNKKQQELINKTFGCCRFVYNKYLAKRIDVYKNDKETFTYKQCSSDLTNLKKELNWLKEPDKFSLQN ALKDLENAYNKFFKEKAGFPKFKSKKTNRFSYKTNFTNGNIVYCGQHIKLPKLGMVKIRDKQVPKGRILNATISKEPSGR YYVSLCCTDVDIEVFENTNNQIGLDLGIKEFCISSCGDFIENPKYLKKSLNKLAKLQSELSRKTIGSLNRNKARLKVARL QEHIANQRKDFLQKLSTKLIKENDIICIEDLQVKNMIKNHKLSRSISDVSWSEFIRQLEYKANWYGRKIVKVGKFFASSQ ICNKCGYKNEEVKDLSIREWICPSCNETHDRDINASINILKEGLRLITIQNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CPR_0626 | YP_697953.1 | ISCpe2, transposase orfB | Not tested | Not named | Protein | 5e-80 | 50 |
