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Name : CDR20291_1647 (CDR20291_1647) Accession : YP_003218142.1 Strain : Clostridium difficile R20291 Genome accession: NC_013316 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1131 EC number : - Position : 1936814 - 1937659 bp Length : 846 bp Strand : + Note : - DNA sequence : ATGATTAAAGTTGATGATTTATCATTTAGTTATACAGATAGAAATTTTTTACAAAATATTAACTTTGAAGTAGAAAAAGG GGAAATACTAGGATTTTTAGGACCATCAGGTGCAGGAAAATCTACATTACAAAAGATTCTAATTGGAATGATAACTAATT ATGGAGGAAGTGTCATTGTAAATGGAGTAGAGAGTAAAAGACACTCAAATAAATTTTATGAAAATATAGGAGTTGATTTT GAATTTCCTAGTTTATATGAAAAGTTGACTGCAATAGAAAATTTAAAATATTTTGGGTCTCTATATTCTAAAAAACTACT ATCTATTGATGAGTTATTAAAATCAGTAGGACTAGAAAATGAAGCAAATAAAAGGGTATCTGAGTATTCAAAAGGTATGA AATCTCGATTAAATTTTATAAAAGCTTTATTACATAATCCAGATATTTTATTTTTAGATGAACCAACAAGTGGTCTTGAC CCGTCAAATAGCAAGGTTATGAAAGATATAATTTTATCAGAAAAATCTAAAGGTAAAACTATTATTTTAACAACTCATAA CATGTTAGATGCAACGGAGCTTTGTGACAGAGTAGCGTTCATTGTAAATGGTAAAATATCTGCTTTAGATACACCACATA ATCTTATTATGTCAAAAGGAGCTATTAAAGTTAGATATACTTACTTTGATAATGGAGAAAAAACTTCTGAATGTTTTCTG AACAATACTGCTAATGATAAAAATTTGAATATGCTTATTAAGAAAAATAAACTTTTATCAATACATAGTAGTGAACCAAC ATTAAATGATATTTTTATTGAGATAACAGGGAGGAATTTACAATGA Protein sequence : MIKVDDLSFSYTDRNFLQNINFEVEKGEILGFLGPSGAGKSTLQKILIGMITNYGGSVIVNGVESKRHSNKFYENIGVDF EFPSLYEKLTAIENLKYFGSLYSKKLLSIDELLKSVGLENEANKRVSEYSKGMKSRLNFIKALLHNPDILFLDEPTSGLD PSNSKVMKDIILSEKSKGKTIILTTHNMLDATELCDRVAFIVNGKISALDTPHNLIMSKGAIKVRYTYFDNGEKTSECFL NNTANDKNLNMLIKKNKLLSIHSSEPTLNDIFIEITGRNLQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0094 | NP_763649.1 | ABC transporter ecsA-like protein | Not tested | SCCpbp4 | Protein | 2e-28 | 43 |
