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Name : thiC (CDR20291_1600) Accession : YP_003218095.1 Strain : Clostridium difficile R20291 Genome accession: NC_013316 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 1886279 - 1887694 bp Length : 1416 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGTTAGGAGAAATTTGTCTAAGTGTATATACGATTATAAGAGTGCTTTCCAAACGAGGAAAAGCACTTTTTTTATTTTC AAAAACTATAACTTTAATCTTGGAGGATTGTAATATGAACTATACAACACAAATGGATGCTGCTAGAAAAGGCATAATAA CTAAAGAAATGGAAATCGTTTCTCAAAAAGAACAGGTAGATGTAAATGAATTAAGAGAATTAATAGCAAATGGACAAGTT GTTATACCAGCTAATAAAAATCATAAATCTTTAAGTGCAGAAGGTGTAGGTAAAAATTTAAGAACAAAAATAAATGTAAA TCTAGGAATTTCAAGAGATTGTAAGGATATAGAAAAAGAACTTGAAAAAGTTAGAGTAGCAATAGACATGAAAGCTGAAG CTATAATGGATTTAAGTAATTATGGCAAAACTAGAGAATTTAGAGAAAAGGTTGTTGAAATGTCACCTGCAATGATAGGT TCAGTACCTATGTATGATGCAGTAGGATATTTGGAAAAAGAATTAAAAGATATAACAGAAGAAGAGTTTTTAAATGTAAT AAGACAACATGCTATTGATGGAGTAGACTTTATTACTATACATGCAGGTCTTACAAGAAGTGTTTGCCAAAAAATAAAAA ATCATGAGAGATTGACTCATATAGTATCTCGTGGAGGTTCTTTATTGTTTGCATGGATGGAATTAAATAATAAGGAAAAT CCTATTTATACTAATTTTGATAAAATATTGGATATATGTGAAGAATATGATGTTACATTGAGTTTAGGAGATGCTTGTAG ACCAGGTTGTATAAAAGATTCTACTGATGGTGTTCAAATTCAAGAACTTGTAGTATTAGGTGAACTTACTAAAAGAGCAT GGGAAAGAAATGTACAAGTAATGATAGAAGGTCCTGGACACATGGCTATTGATGAAATAGAAGCAAATGTAGTATTAGAA AAGAGATTATGCCATGGAGCACCTTTTTATGTTCTTGGACCATTGGTTACAGATATAGCACCAGGTTATGACCATATAAC AAGTGCAATAGGAGGAGCTTTAGCATGTGCTAAAGGAGTAGATTTTTTATGTTATGTAACTCCAGCAGAACATTTAAGAT TGCCTAATTTAGATGATATGAAAGAGGGTATAATAGCTGCAAAGATAGCTGCTCATGCAGGAGATATAGCTAAAAATGTT AAAGGTGCTCGTGAATGGGATAATAAGATGAGTAAAGCTAGAGCTGATTTAGACTGGTGTGAGATGTTTAGACTTGCAAT AGACCCTGAAAAAGCTAAGAGATACAGAGATGAATCAACTCCTACTCATGAGGATAGTTGTACTATGTGTGGAAAAATGT GCTCAATGAGAACAGTTAAGAAAATATTAAACAATGAGGAACTTAATCTAATATAA Protein sequence : MLGEICLSVYTIIRVLSKRGKALFLFSKTITLILEDCNMNYTTQMDAARKGIITKEMEIVSQKEQVDVNELRELIANGQV VIPANKNHKSLSAEGVGKNLRTKINVNLGISRDCKDIEKELEKVRVAIDMKAEAIMDLSNYGKTREFREKVVEMSPAMIG SVPMYDAVGYLEKELKDITEEEFLNVIRQHAIDGVDFITIHAGLTRSVCQKIKNHERLTHIVSRGGSLLFAWMELNNKEN PIYTNFDKILDICEEYDVTLSLGDACRPGCIKDSTDGVQIQELVVLGELTKRAWERNVQVMIEGPGHMAIDEIEANVVLE KRLCHGAPFYVLGPLVTDIAPGYDHITSAIGGALACAKGVDFLCYVTPAEHLRLPNLDDMKEGIIAAKIAAHAGDIAKNV KGAREWDNKMSKARADLDWCEMFRLAIDPEKAKRYRDESTPTHEDSCTMCGKMCSMRTVKKILNNEELNLI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 2e-69 | 46 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 2e-69 | 46 |
