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Name : kdpA (CDR20291_1489) Accession : YP_003217985.1 Strain : Clostridium difficile R20291 Genome accession: NC_013316 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit A Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2060 EC number : - Position : 1757496 - 1759172 bp Length : 1677 bp Strand : + Note : catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions DNA sequence : ATGGTGCAGATAGTAATAGTGTTAGCGATTTTTATGATTTTAGTAATACCTATGGGCAAGTATTTATATCATATAGCTAC TAATCAAAAAACATTTGGAGATAGACTATTTGATAAAGTGGACAATTTTATATATAAGGTATGTAGTATAGATAAGAAAA AAGAAATGAACTGGAAACAGTATGCATTAGCTTTATTATTTACAAATGCAGTTATGGTATTTATAGGATATATCATACTT AGAACTCAAAGTATGCATATTTTTAATCCAAGTGGAATTAAAAGTATGGAACAAGGACTATCATTTAATACAATAATAAG TTTTATGACAAATACAAATCTTCAACATTATTCAGGTGAATCAGGACTTTCATACTTTAGTCAGATGACAGTGATAATAT ATATGATGTTTACATCAGCAGCAACAGGATATGCGGCTGCTATGGCATTTGTAAGAGGTCTAGTCGGTAAAAAGAAAACA TTGGGAAATTTTTATGTAGATTTAATTAGGATAACAACAAGAGTACTTTTACCAGGAGCTTTAATTATTGGGCTTATATT AGTTACACAAGGAGTACCACAAACTTTTGCTGGGACAGAAACAGTGACTACTATAGAAGGAAAGCTTCAAGATATAGCTA GAGGTCCTGTGGCAGCTCTTGAATCAATAAAACATTTAGGAACAAATGGTGGTGGATTCTTTGGTTCAAATTCATCACAC CCATTTGAAAATCCAACAATAATATCAAATATAGTAGAAATATTATCTATGATGATATTACCAGGAGCTTGTGTTGTTGC ATTCGGTCACATGATAAAGAATAAAAAACAAGGTTGGGTTGTGTTTGGCGCAATGTCAATCATATTTTTAATAGGTCTAG TAGTGTGCTTTAAAGCAGAAAGTGCAGGAAACCCTATTTTATCACAATTAGGGCTTAATCAAAGTATGGGAAGTATGGAA GGTAAGGAAGTTAGATTTGGTATAGCACAATCATCATTATTCACAACAGTGACTACTTCCTTTACGACAGGTACAGTTAA TAATATGCATGATACACTGACTCCTTTAGGAGGATTAGTACCACTTTTAAATATGATGCTAAATGTAGTATTTGGTGGTA AAGGCGTAGGTCTGATGAATATGTTGATGTACGCTATAATAGCAGTATTCTTATGTGGATTAATGGTAGGAAGAACACCA GAGTTTTTAACTAAGAAAATCGAAGGAAAAGAAATGAAGCTTATTGCTTTACTTATTATATTACATCCACTTTTAATACT AATGTTCTCTGGTCTTTCAGTAGCAATACCAGCAGGGCTTGAAGGAATTTCAAATCCTGGATTCCATGGATTATCACAGG TATTGTATGAGTTTGCATCTTCAGCAGCCAATAATGGTTCAGGATTTGAAGGTCTAGGAGATAACACTATGTTTTGGAAT ATAACAACAGGTATAGTTATGTTCTTTGGAAGATATGTGTCTATTATAGTACTACTAGCAATATCAAGTTTGTTAGCATC TAAAAAAGCTGTAAATGAAAGTATAGGAACACTTAGAACGGATAATTTTACATTTACAATAGTTTTAGTACTTGTTGTTT TAATTGTTGGTGCTTTAACATTTTTCCCAGCCTTAGCGCTTGGACCTATTTCGGAGCATCTAGTGTTGTGGCACTAA Protein sequence : MVQIVIVLAIFMILVIPMGKYLYHIATNQKTFGDRLFDKVDNFIYKVCSIDKKKEMNWKQYALALLFTNAVMVFIGYIIL RTQSMHIFNPSGIKSMEQGLSFNTIISFMTNTNLQHYSGESGLSYFSQMTVIIYMMFTSAATGYAAAMAFVRGLVGKKKT LGNFYVDLIRITTRVLLPGALIIGLILVTQGVPQTFAGTETVTTIEGKLQDIARGPVAALESIKHLGTNGGGFFGSNSSH PFENPTIISNIVEILSMMILPGACVVAFGHMIKNKKQGWVVFGAMSIIFLIGLVVCFKAESAGNPILSQLGLNQSMGSME GKEVRFGIAQSSLFTTVTTSFTTGTVNNMHDTLTPLGGLVPLLNMMLNVVFGGKGVGLMNMLMYAIIAVFLCGLMVGRTP EFLTKKIEGKEMKLIALLIILHPLLILMFSGLSVAIPAGLEGISNPGFHGLSQVLYEFASSAANNGSGFEGLGDNTMFWN ITTGIVMFFGRYVSIIVLLAISSLLASKKAVNESIGTLRTDNFTFTIVLVLVVLIVGALTFFPALALGPISEHLVLWH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpA | YP_251948.1 | potassium-transporting ATPase subunit A | Not tested | SCCmec | Protein | 2e-88 | 53 |
| SAR0070 | YP_039538.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 2e-88 | 52 |
| truncated-kdpA | NP_370596.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 2e-88 | 52 |
| kdpA | NP_373308.2 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 2e-88 | 52 |
| kdpA | YP_190030.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 2e-88 | 52 |
| unnamed | BAB43902.1 | potassium-transporting ATPase(A chain) | Not tested | Type-II SCCmec | Protein | 1e-88 | 52 |
