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Name : CDR20291_1426 (CDR20291_1426) Accession : YP_003217923.1 Strain : Clostridium difficile R20291 Genome accession: NC_013316 Putative virulence/resistance : Unknown Product : snf2-related protein Function : - COG functional category : K : Transcription COG ID : COG0553 EC number : - Position : 1686851 - 1688221 bp Length : 1371 bp Strand : + Note : subname: full=phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase DNA sequence : ATGGAATTTAAACCACATCCATACCAAGAATACACAATTAGAAAAACTATAGATAATAATAATATAGGTTTACTATTAGA TATGGGATTAGGTAAAACAGTCTGTACTCTAACAGCTATAAGTGAATTAATGTATGATTACTTTGATATATCAAAAGTTT TAGTTATAGCACCTTTAAGAGTTGCAAGAGATACCTGGAGTAGTGAAGTAAAAAAATGGGAACATCTAAAGCATCTAAAA GTATCTAAAGTTCTTGGTAGTAAATTAGATAGAGTGAGAGCTTTAAGTACAGACTCAGATATTTATATAATAAATAGAGA AATGGTACCCTGGATAGTGGATTTTTATAAAAGAAAATGGCCATTTGATATGGTTGTGATAGATGAACTTAGTTCTTTTA AATCAAATAAAGCACAACGATTTAAAAGTTTAAAGAAAGTATTGCCTTTAACTAAAAGAGTAGTTGGGCTTACTGGTACA CCAACACCAAATAGTTTAATAGACTTATGGGCACAGATGTACTTACTTGATAGAGGTGAAAGACTAGGTAAAACTATTAC AGGATATAAAGAACGATACTTTGAGCCAGGACAAAAAAATTATCAAACAGGAGCTATATATAATTGGCAACCTAAAAATG GAGCAGAAAATGCAATACATAATAAAATAAAAGATATTTGTATAAGCTTAAAAGCAGAAGATTATTTGAATATGCCTAGA AAAATAGATAATAAAATTGAAATACACCTTGATAGTAAAATACTTAAATATTACAAAGAATTAGAAAAAGAGAAGATATT AGAATTAGATAGAGATATAATAACAGCTTCATCAGCAGCTGTAGCAGCAAATAAACTTTTACAATTAGCTAATGGAGCAA TTTATGATAATGATAAAAATGTAAAGGAACTCCATAGAGAAAAATTAGAAGCTTTAAAAGAAATTATAGATGTTTCAAAT GGTAAGCCTATTATAGTTTTTTATAACTATAAACATGATTATAATCGTTTAATGAAAGAGTTTAAGAGTTTGAAACCAAG AACAATAGAAAACTCAAAAGATATATATGATTGGAATAATGGAAGAATACAATTATTACTTTGTCATCCAGCAAGTACAG GACATGGACTTAATTTACAATCAGGTGGAAGTATAATTGTTTGGTTTGGATTAACTTGGAGCTTAGAACTGTATCAACAA GCTAATGCAAGGCTTTATAGACAGGGTCAAAGGGAAACTGTTATTATCCATCATCTAATCTGTAAAGGTACAATAGATGA ACAAGTAATGGAAGCTATAGAGAATAAGGATAAAGGGCAAAGTGCATTACTTGAAGCAGTAAAAGCAAAATTAAAAGAAT ATAGGGAGTGA Protein sequence : MEFKPHPYQEYTIRKTIDNNNIGLLLDMGLGKTVCTLTAISELMYDYFDISKVLVIAPLRVARDTWSSEVKKWEHLKHLK VSKVLGSKLDRVRALSTDSDIYIINREMVPWIVDFYKRKWPFDMVVIDELSSFKSNKAQRFKSLKKVLPLTKRVVGLTGT PTPNSLIDLWAQMYLLDRGERLGKTITGYKERYFEPGQKNYQTGAIYNWQPKNGAENAIHNKIKDICISLKAEDYLNMPR KIDNKIEIHLDSKILKYYKELEKEKILELDRDIITASSAAVAANKLLQLANGAIYDNDKNVKELHREKLEALKEIIDVSN GKPIIVFYNYKHDYNRLMKEFKSLKPRTIENSKDIYDWNNGRIQLLLCHPASTGHGLNLQSGGSIIVWFGLTWSLELYQQ ANARLYRQGQRETVIIHHLICKGTIDEQVMEAIENKDKGQSALLEAVKAKLKEYRE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH1779 | YP_253694.1 | hypothetical protein | Not tested | ¥ÕSh1 | Protein | 3e-117 | 55 |
| SAOV_0314 | YP_005735831.1 | putative DNA helicase | Not tested | ¥ÕSa1 | Protein | 2e-118 | 55 |
| SEQ_2070 | YP_002747285.1 | SNF2 family phage protein | Not tested | ¥ÕSeq4 | Protein | 9e-107 | 54 |
| SAUSA300_1408 | YP_494105.1 | phage helicase | Not tested | ¥ÕSa2 | Protein | 5e-109 | 54 |
| MW1405 | NP_646222.1 | hypothetical protein | Not tested | ¥ÕSa2 | Protein | 2e-118 | 54 |
