|
Name : rplS (CDR20291_1097) Accession : YP_003217595.1 Strain : Clostridium difficile R20291 Genome accession: NC_013316 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 1317480 - 1317830 bp Length : 351 bp Strand : + Note : - DNA sequence : ATGAATGAAATGCTAAGAGCAATTGAGCAAGAACAATTAAAAAATGAAGTTCCTAATTTTGGACCTGGGGACACAGTTAA AGTACACGTTAGAATTATAGAAGGAAAAAGAGAAAGAATACAAGTATTCGAAGGTGTAGTATTAAAGAGACAAGGTGGAG GAGCAAGAGAAACTTTCACAGTTAGAAAAATGTCTTTCAATGTTGGTGTAGAAAGAACTTTCCCAGTTCACTCTCCAAAA ATAGAAAAAATAGAAGTTACTAGAAAAGGTAAAGTAAGAAGAGCTAAACTAAACTACTTAAGAGGTAGAGTAGGTAAAGC TGCTAAGATAAAAGAAGCTAGAAATAAATAA Protein sequence : MNEMLRAIEQEQLKNEVPNFGPGDTVKVHVRIIEGKRERIQVFEGVVLKRQGGGARETFTVRKMSFNVGVERTFPVHSPK IEKIEVTRKGKVRRAKLNYLRGRVGKAAKIKEARNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 3e-33 | 66 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 1e-26 | 55 |
