Gene Information

Name : CDR20291_1072 (CDR20291_1072)
Accession : YP_003217571.1
Strain : Clostridium difficile R20291
Genome accession: NC_013316
Putative virulence/resistance : Unknown
Product : integrase, catalytic region
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1290537 - 1291436 bp
Length : 900 bp
Strand : +
Note : -

DNA sequence :
GTGGTAATTACACTATCCAAGAATGAAGATAAATATAAAGCGATTCAATCCTTATTCAATGAAAAAAAAGCTTCGCTTAT
ACAATTATGTGAAATCGCTAAAGTAAATCGTTCTGGATACTATAAATGGCTCAATCGAGATAAAAGTAATTTAGAACTTG
AAAACATTAAATTAGCAACTTTGATAACTAAGATATATGAAGAAAAGAAGGGAGTTTTTGGCTCTTTAAGGATGACCTTG
CAGTTAAACAGAGAGTATAAACTTAATGTCAATCACAAGAGAGTGTACAGACTAATGAGAGCCGTAGGCTTAAGGTCTAT
TTGTAGAAAAAAGAAATTTAGTTATGTTAAATGTACACCAGAAGTAATTGCTGAAAATGTATTAAATAGAAAATTTAGTG
CAGATAAAACTTCTCAAAAATGGTTAACAGATGTAACTGAATTTAAATTAACCAACGGGACAAAGGCTTATTTAAGTGCA
ATTCTGGATTTAGGTGATAGAAGCATAGTTTCATATGTTATTGGAAAATCAAATAACAATAACTTAGTATTCGAAACTTT
TAATAAAGCAATAGAAGTATATCCAAATGCAAAACCTATCTTTCATAGTGATAGAGGCTATCAGTATACTAGCAGGGTGT
TTAAATCAAAACTTTTAACACAAGGCATGATACAAAGTATGTCGAGAGTTGGTCATTGTATTGACAATGCTCCTATGGAA
GGATTTTGGGGAATTTTAAAAGTGGAAATGTACTATTTAAGGAAATTTGATACATACGAACAATTAGTCAAAGCAATAGA
TGATTATATATATTACTATAATAATTTTAGATATCAAAAGAGATTAAATTCTATGTCTCCACTTGAATTTAGGAAATATT
TAAGTACAGAGATAGCATAA

Protein sequence :
MVITLSKNEDKYKAIQSLFNEKKASLIQLCEIAKVNRSGYYKWLNRDKSNLELENIKLATLITKIYEEKKGVFGSLRMTL
QLNREYKLNVNHKRVYRLMRAVGLRSICRKKKFSYVKCTPEVIAENVLNRKFSADKTSQKWLTDVTEFKLTNGTKAYLSA
ILDLGDRSIVSYVIGKSNNNNLVFETFNKAIEVYPNAKPIFHSDRGYQYTSRVFKSKLLTQGMIQSMSRVGHCIDNAPME
GFWGILKVEMYYLRKFDTYEQLVKAIDDYIYYYNNFRYQKRLNSMSPLEFRKYLSTEIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EFAU085_00737 YP_008394261.1 ISEnfa3, transposase Not tested Not named Protein 2e-35 41