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Name : deoA (CDR20291_1063) Accession : YP_003217562.1 Strain : Clostridium difficile R20291 Genome accession: NC_013316 Putative virulence/resistance : Unknown Product : pyrimidine-nucleoside phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : - Position : 1278629 - 1279969 bp Length : 1341 bp Strand : + Note : - DNA sequence : ATGGAGATTTCAATTATGAGAATGTATGATATTATAAAAAAAAAGAGAGATAACTTAGAGCTTAGTAAAAAAGAGATAAA CTACTTTATAGAAAACTATTCAAAGGGAGATATACCTGACTATCAAGCTTCTGCACTATTAATGTCGATTTATTTAAATA AGATGAATAAACAGGAAACTGTACATCTTACAGAAGCAATGATGAACTCTGGAGACATGATAAACCTGTCTGAGGTAGAT GGAATAAAGGTAGATAAGCATAGTACTGGTGGTGTTGGAGATAAGACTACCATAGCTCTTATACCTTTGGTTGCTTCATG TGGAGCACCAGTTGCAAAGATGTCAGGTAGAGGTCTTGGTCATACTGGTGGTACTATTGATAAATTGGAGTCTATACCAG GTTTTTCGACAGAAATGGAGATAAGTAAATTTATTGATTCTGTAAATAAGTCTAAAATAGCAGTTTGTGGTCAAAGTGCA AAGGTAGCAATTGCAGATAAGAAAATATATGCTCTTAGAGATGTTACAGCAACTGTTGATAATATATCATTGATATCATC AAGTGTAATGTCTAAAAAGTTAGCTTCAGGAGCTGATGCAATTGTGTTAGATGTAAAAACTGGTGATGGAGCATTTATGA AGACATTAGAAGAGTCTTTTGAGTTAGCTAAATCTATGGTTGATATAGGTACTGGTATGAATAGAGATACAATAGGGATT GTAACAGATATGGATGAACCTTTAGGTTTTGCAGTGGGAAACTCTTTAGAAGTTATAGAAGCAATTGAGACATTAAAAGG AAATGGCCCTAAAGACCTTGTTGAGCTATGTGAAGTATTAGGAGCATATATGTTGGTTTTATCAAAGGTAGCACATGATT TTGAAGATGGTGTTGAAAAGATAAGAGAATCAATAAAATCTGGTACTGCTATACAAAAACTCAAAGAGTTTATAGAGAAT CAAGGTGGTAATAAAGATGTAGTAGATGATTATTCTTTATTCAAAAAATCAAAGTATAAATATCCAGTTAAATCAATTAA ATCAGGTTATATAAGTAAAATTAAAGCTGAAGATGTTGGTGTATCAGCTATGATTCTTGGAGCAGGTAGAGAAACTAAAG ATGATATTTTAGATTTATCAGCAGGGATAATTTTAGAAAAGAAAGTAGGAGATTATGTAAATGAAGGTGAAGTTTTAGCT TACATGTATTATAATGATGAACAAAAGCTTTCATTGGCAAAGGGAAGATTTATTGATTCCTACTCTATTGTAGATTCAAA AATAGAAAAAAATAAATTAATATATGGTATTGTAACTAAAGAAGAGATTAAAAAGTTTTAG Protein sequence : MEISIMRMYDIIKKKRDNLELSKKEINYFIENYSKGDIPDYQASALLMSIYLNKMNKQETVHLTEAMMNSGDMINLSEVD GIKVDKHSTGGVGDKTTIALIPLVASCGAPVAKMSGRGLGHTGGTIDKLESIPGFSTEMEISKFIDSVNKSKIAVCGQSA KVAIADKKIYALRDVTATVDNISLISSSVMSKKLASGADAIVLDVKTGDGAFMKTLEESFELAKSMVDIGTGMNRDTIGI VTDMDEPLGFAVGNSLEVIEAIETLKGNGPKDLVELCEVLGAYMLVLSKVAHDFEDGVEKIRESIKSGTAIQKLKEFIEN QGGNKDVVDDYSLFKKSKYKYPVKSIKSGYISKIKAEDVGVSAMILGAGRETKDDILDLSAGIILEKKVGDYVNEGEVLA YMYYNDEQKLSLAKGRFIDSYSIVDSKIEKNKLIYGIVTKEEIKKF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 3e-71 | 43 |
