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Name : CD196_0716 (CD196_0716) Accession : YP_003213751.1 Strain : Clostridium difficile CD196 Genome accession: NC_013315 Putative virulence/resistance : Unknown Product : transposase-like protein b Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0675 EC number : - Position : 867220 - 868338 bp Length : 1119 bp Strand : + Note : - DNA sequence : GTGATAGTAGTGGAAAAAGCTTATAAGTTTAGAATGTATCCAAATAAAAAACAGCAAGAGTTAATTAACAAAACTTTTGG ATGTTGTAGATTTGTATATAATAAGTATCTTGCTAAAAGAATAGAAGTTTATAAAAATGCTAAAGAAACTTTTACTTATA AACAGTGTAGTTCTGATTTGACCAATTTAAAAAAAGAATTAAATTGGCTTAAAGAACCTGACAAATTTTCACTACAAAAC GCCTTAAAAGATTTAGATAATGCATATAAAAAATTCTTTAAAGAAAAAGCAGGATTTCCTAAATTTAAATCAAAGAAAAT TAATAGATTTTCATATAAAACTAACTTCACAAATGGAAACATTATGTATTGTGGTCAACATATAAAACTACCTAAACTTG ATATGGTTAAGATAAGGGATAAACAAGTACCTAAAGGGAGAATACTTAATGCTACTATATCTAAAGAACCAAGTGGTAGA TATTATGTATCATTATGTTGTACTGATGTAGATATTGAAGCATTTGAAAATACTAATAATCAGATAGGTTTAGATTTAGG AATTAAAGAATTTTGTATCTCAAGTTGTGGAGAATTTATAGAAAATCCTAAGTATCTTAAGAAGTCATTAAACAAACTTG CTAAATTACAAAGAGAATTATCGAGAAAAACAATCGGTAGTTTAAATAGAAATAAAGCAAGATTAAAAGTTGCAAGACTT CAAGAACATATAGCTAATCAAAGAAATGATTTTCTACAAAAACTATCTACTAAACTAATAAAAGATAACGATATTATTTG CATAGAAGATTTACAAGTAAAGAATATGATTAGAAATCGTAAACTATCTCGCTTAATTTCTGATGTGTCATGGTCAGAAT TTATTCGTCAATTAGAATACAAGGCTAATTGGTATGGTAGACAAATTGTAAAGGTAGGTAAATTCTTTGCAAGTTCACAA ATATGCAATAAATGTGGGTATAAAAACGAGGAAGTTAAGGATTTAAATATAAGAGAATGGATTTGTCCTAGTTGTAATGA AACTCACGATAGAGATATAAATGCAAGTATAAATATATTAAAAGAAGGATTAAGATTAATAACAATTCAAAATAAATAA Protein sequence : MIVVEKAYKFRMYPNKKQQELINKTFGCCRFVYNKYLAKRIEVYKNAKETFTYKQCSSDLTNLKKELNWLKEPDKFSLQN ALKDLDNAYKKFFKEKAGFPKFKSKKINRFSYKTNFTNGNIMYCGQHIKLPKLDMVKIRDKQVPKGRILNATISKEPSGR YYVSLCCTDVDIEAFENTNNQIGLDLGIKEFCISSCGEFIENPKYLKKSLNKLAKLQRELSRKTIGSLNRNKARLKVARL QEHIANQRNDFLQKLSTKLIKDNDIICIEDLQVKNMIRNRKLSRLISDVSWSEFIRQLEYKANWYGRQIVKVGKFFASSQ ICNKCGYKNEEVKDLNIREWICPSCNETHDRDINASINILKEGLRLITIQNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CPR_0626 | YP_697953.1 | ISCpe2, transposase orfB | Not tested | Not named | Protein | 2e-78 | 48 |
