Gene Information

Name : tcdD (CD196_0599)
Accession : YP_003213638.1
Strain : Clostridium difficile CD196
Genome accession: NC_013315
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 709139 - 709693 bp
Length : 555 bp
Strand : +
Note : -

DNA sequence :
ATGCAAAAGTCTTTTTATGAATTAATTGTTTTAGCAAGAAATAACTCAGTAGATGATTTGCAAGAAATTTTATTTATGTT
TAAGCCATTAGTAAAAAAACTTAGTAGAGTTTTACATTATGAAGAGGGAGAAACAGATTTAATAATATTTTTTATTGAAT
TAATAAAAAATATTAAATTAAGTAGCTTTTCAGAAAAAAGCGATGCTATTATAGTCAAATATATTCATAAATCATTACTG
AATAAGACTTTTGAGTTGTCTAGAAGATATTCTAAAATGAAGTTTAATTTTGTAGAATTTGATGAAAATATCTTAAATAT
GAAAAATAATTATCAAAGTAAGTCTGTTTTTGAGGAAGATATTTGTTTTTTCGAATATATTTTGAAAGAATTATCTGGTA
TTCAAAGAAAAGTTATTTTTTATAAATATTTAAAAGGATATTCTGATAGAGAAATATCAGTGAAATTAAAAATATCTAGA
CAAGCTGTTAATAAGGCTAAAAATAGAGCATTTAAAAAAATAAAAAAAGACTATGAAAATTATTTTAACTTGTAA

Protein sequence :
MQKSFYELIVLARNNSVDDLQEILFMFKPLVKKLSRVLHYEEGETDLIIFFIELIKNIKLSSFSEKSDAIIVKYIHKSLL
NKTFELSRRYSKMKFNFVEFDENILNMKNNYQSKSVFEEDICFFEYILKELSGIQRKVIFYKYLKGYSDREISVKLKISR
QAVNKAKNRAFKKIKKDYENYFNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tcdD CAA63561.1 - Virulence PaLoc Protein 5e-72 100