Gene Information

Name : CD196_0585 (CD196_0585)
Accession : YP_003213624.1
Strain : Clostridium difficile CD196
Genome accession: NC_013315
Putative virulence/resistance : Resistance
Product : lantibiotic ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 689445 - 690374 bp
Length : 930 bp
Strand : +
Note : -

DNA sequence :
ATGATGAACTATATCATAGAGACCCATCAATTAAAGAAAATATATAAAGATAAAGCTGTTGTTAATGATGTTAATATTCA
TGTGAAAAAGGGAGAAATTTATGGATTTGTTGGACCAAATGGAGCAGGTAAAAGTACAGTAATGAAAATGTTGCTAAATC
TCGTTAAGCCAAATTCTGGAGAAATAGTTATGTTCAGTAAGAAAGTGGCAGAAACTGATTTTGAAATATTAAAAAAGATT
GGTACTATTATTGAAAATCCTTATTTCTATGAGAATTTGACTGCTAAACAGAATCTTGATTTACACTGTGAATATATGGG
TTATTATAACAAAGAACATATATCAGAGGTATTGGAATGTGTCGGATTGTCAAAGCAATCAAACAAGAAAGTTTCAAAAT
ATTCTTTAGGGATGAAACAACGTCTTGCAATAGCTAGAGCAATTCTTACTAAACCAGAATTATTGATTCTTGATGAACCT
ATAAATGCACTCGACCCAGAGGGGATAAGAGAAATGCGAGAATTATTCCGTAAGTTAAATACAGATTATGGAATAACTAT
ATTTATTTCTAGTCATATTCTTTCAGAGGTAGAACAAATTGCGGACACTATTGGAATTATTCAAGATGGTAAACTTATTA
AAGAAATTTCTATGTCAGATATACACAAATATCAAACAGATTATGTTGAAGTAGATGTAGATAATGTGGAACTTGCTGGA
TACTTGTTAGAAAAAGAATTTGGAATAAAAGACTTTAAAATTACTTCGGAAAGTTGTATTGAAATATATGATTTACGAAA
AGATGTAAAAGAAATATCCAAAATATTTATCAAAAATCAAATTGGTATAAATAGCATTGGACGTAAACAAAGTTCTTTAG
AAGATTACTTCTTCCAAACTACAGGTACAGGAGGTATAGAAACACTATGA

Protein sequence :
MMNYIIETHQLKKIYKDKAVVNDVNIHVKKGEIYGFVGPNGAGKSTVMKMLLNLVKPNSGEIVMFSKKVAETDFEILKKI
GTIIENPYFYENLTAKQNLDLHCEYMGYYNKEHISEVLECVGLSKQSNKKVSKYSLGMKQRLAIARAILTKPELLILDEP
INALDPEGIREMRELFRKLNTDYGITIFISSHILSEVEQIADTIGIIQDGKLIKEISMSDIHKYQTDYVEVDVDNVELAG
YLLEKEFGIKDFKITSESCIEIYDLRKDVKEISKIFIKNQIGINSIGRKQSSLEDYFFQTTGTGGIETL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 1e-46 51
cdd4 CAA63569.1 - Not tested PaLoc Protein 1e-51 43
SSU98_0954 YP_001200512.1 hypothetical protein Not tested 89K Protein 1e-37 41
SSU05_0946 YP_001198312.1 hypothetical protein Not tested 89K Protein 1e-37 41