|
Name : CD196_0516 (CD196_0516) Accession : YP_003213559.1 Strain : Clostridium difficile CD196 Genome accession: NC_013315 Putative virulence/resistance : Unknown Product : transposase-like protein b Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0675 EC number : - Position : 606336 - 607454 bp Length : 1119 bp Strand : + Note : - DNA sequence : GTGGTAGTAGTGGAAAAAGCTTATAAGTTTAGAATGTATCCAAATAAAAAACAGCAAGAGTTAATTAACAAAACTTTTGG ATGTTGTAGATTTGTATATAATAAGTATCTTGCTAAAAGAATAGAAGTTTATAAAAATGCTAAAGAAACTTTTACTTATA AACAGTGTAGTTCTGATTTAACCAATTTAAAAAAAGAATTAAAATGGCTTAAGGAACCTGACAAATTTTCACTACAAAAC GCCTTAAGAGATTTAGATAATGCATATAAAAAATTCTTTAAAGAAAAAGCAGGATTTCCTAAATTTAAATCAAAGAAAAT TAATAGATTTTCATATAAAACTAACTTTACAAATGGAAACATTATGTATTGTGGTCAACATATAAAACTACCTAAACTTG GTATGGTTAAGATAAGGGATAAACAAGTACCTAAAGGGAGAATACTTAATGCTACTATATCTAAAGAACCAAGTGGTAGA TATTATGTATCATTATGCTGTACTGATGTAGATATTGAAGCATTTGAAAATACTAATAATCATATAGGTTTAGATTTAGG AATTAAAGAATTTTGTATCTCAAGTTGTGGAGACTTTATAGAAAATCCTAAGTATCTTAAGAAGTCATTAAACAAACTTG CTAAATTACAAAGAGAATTATCGAGAAAAACAATCGGTAGTTTAAACAGAAATAAAGCAAGATTAAAAGTTGCAAGACTT CAAGAACATATAGCCAATCAAAGAAATGATTTTCTACAAAAACTATCTACTAAATTAATAAAAGAGAACGATATTATTTG CATAGAAGATTTACAAGTAAAGAATATGATTAGAAATCGTAAACTATCTCGTTTAATTTCAGATGTATCATGGTCAGAGT TTATTCGTCAATTAGAATACAAGGCTAATTGGTATGGTAGACAAATTGTAAAGGTAGGTAAATTCTTTGCAAGTTCACAA ATATGCAATAAATGTGGGTATAAAAACGAGGAAGTGAAGAACTTAAATATAAGAGAATGGATTTGTCCTAGTTGTAATGA AACTCACGATAGAGATATAAATGCAAGTATAAATATATTAAAAGAAGGATTAAGATTAATAACAATTCAAAATAAATAA Protein sequence : MVVVEKAYKFRMYPNKKQQELINKTFGCCRFVYNKYLAKRIEVYKNAKETFTYKQCSSDLTNLKKELKWLKEPDKFSLQN ALRDLDNAYKKFFKEKAGFPKFKSKKINRFSYKTNFTNGNIMYCGQHIKLPKLGMVKIRDKQVPKGRILNATISKEPSGR YYVSLCCTDVDIEAFENTNNHIGLDLGIKEFCISSCGDFIENPKYLKKSLNKLAKLQRELSRKTIGSLNRNKARLKVARL QEHIANQRNDFLQKLSTKLIKENDIICIEDLQVKNMIRNRKLSRLISDVSWSEFIRQLEYKANWYGRQIVKVGKFFASSQ ICNKCGYKNEEVKNLNIREWICPSCNETHDRDINASINILKEGLRLITIQNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CPR_0626 | YP_697953.1 | ISCpe2, transposase orfB | Not tested | Not named | Protein | 2e-78 | 49 |
