|
Name : CD196_0484 (CD196_0484) Accession : YP_003213529.1 Strain : Clostridium difficile CD196 Genome accession: NC_013315 Putative virulence/resistance : Unknown Product : ornithine cyclodeaminase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG2423 EC number : - Position : 568534 - 569523 bp Length : 990 bp Strand : + Note : catalyzes the formation of L-proline from L-ornithine DNA sequence : ATGCTACTTTTAAAAAAAGACGACATAAAAAAAGTATTTACAATGAGAGATGCAATTGAAGCTGATAAGGAAGCTTTTAG AATTTATTGTGAAGGAAAGAGTGTAAATCCTTTGAGAACCAATATATCTGTTCCAAGTCAAGATGCTAGTATGTTATTTA TGCCAGGATACGTAGAAGAATTAGGCTGTGGGGGAATAAAAATTGTATCTGTATTTCCTAAAAATGCTCAAAAAGGCAAA CCAGTAATTCCAGCAACAGTACTATTATTAGATGGAGAAACTGGAGAAGTTAGTGCAGTATTGGATGGTACTTATGTAAC TCAGATTCGTACTGGAGCAGCCTCTGGAGCAGCTATAGATGTATTGGCTAAAAAAGATTCTAAGATTGGAGCTTTGATAG GTCTAGGAGGACAAGGTGAGCCACAACTTGAAGCCATGATAGAAGCTAGAAATTTGGATGAGGTAAGAGTTTTTAGTAGA AACAGGGAAAGTAGAGAAAAATTTGCAGAAGAAATGAACTTAAAATTAAGTAAATATAATACTAAAATAGTTGCAGTTGA ATCATCTGATGAAGCCATAGATAACGCAGATGTGATAGTTTTAGCTACTCCATCAAAACAACCAGTACTTAATGGAAACT TAGTGAAAAAAGGAGCTTTAATAAGTGCAGTAGGTTCATATATGCCAGATATGCAAGAGTTGTGCCCAAACTGTTTAACT AGAGCGTCTAAGATATTTTTTGAATCAACAGATGCAGTTTTATCTGAGTCAGGAGATATATTAATTCCATTAAAAGAAGG TAAGATAAGTAAAGATGATTTTAGTGGTGATTTAGGAAACGTTATAAATGGAACTATTCCTGGAAGAGAAGATGATGATG AGATAATTGTATTTAAAACTGTTGGGATAGGTGTACAAGATGTCGTAACAGCAAAAAGAATATACGATAAAGCAAAAGAA AACGGTATTGGAATAGACTGGAAGTGGTAA Protein sequence : MLLLKKDDIKKVFTMRDAIEADKEAFRIYCEGKSVNPLRTNISVPSQDASMLFMPGYVEELGCGGIKIVSVFPKNAQKGK PVIPATVLLLDGETGEVSAVLDGTYVTQIRTGAASGAAIDVLAKKDSKIGALIGLGGQGEPQLEAMIEARNLDEVRVFSR NRESREKFAEEMNLKLSKYNTKIVAVESSDEAIDNADVIVLATPSKQPVLNGNLVKKGALISAVGSYMPDMQELCPNCLT RASKIFFESTDAVLSESGDILIPLKEGKISKDDFSGDLGNVINGTIPGREDDDEIIVFKTVGIGVQDVVTAKRIYDKAKE NGIGIDWKW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0616 | NP_814373.1 | ornithine cyclodeaminase | Not tested | Not named | Protein | 4e-73 | 50 |
| ef0124 | AAM75325.1 | EF0124 | Not tested | Not named | Protein | 3e-73 | 50 |
