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Name : CD196_0396 (CD196_0396) Accession : YP_003213442.1 Strain : Clostridium difficile CD196 Genome accession: NC_013315 Putative virulence/resistance : Unknown Product : integrase, catalytic region Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 460834 - 461733 bp Length : 900 bp Strand : - Note : - DNA sequence : GTGGTAATTACACTATCCAAGAATGAAGATAAATATAAAGCGATTCAATCCTTATTCAATGAAAAAAAAGCTTCGCTTAT ACAATTATGTGAAATCGCTAAAGTAAATCGTTCTGGATACTATAAATGGCTCAATCGAGATAAAAGTAATTTAGAACTTG AAAACATTAAATTAGCAACTTTGATAACTAAGATATATGAAGAAAAGAAGGGAGTTTTTGGCTCTTTAAGGATGACCTTG CAGTTAAACAGAGAGTATAAACTTAATGTCAATCACAAGAGAGTGTACAGACTAATGAGAGCCGTAGGCTTAAGGTCTAT TTGTAGAAAAAAGAAATTTAGTTATGTTAAATGTACACAAGAAGTAATTGCTGAAAATGTATTAAATAGAAAATTTAGTG CAGATAAAACTTCTCAAAAATGGTTAACAGATGTAACTGAATTTAAATTAACCGACGGGACAAAGGCTTATTTAAGTGCA ATTCTGGATTTAGGTGATAGAAGCATAGTTTCATATGTTATTGGAAAATCAAATAACAATAACTTAGTATTCGAAACTTT TAATAAAGCAATAGAAGTATATCCAAATGCAAAACCTATCTTTCATAGTGATAGAGGCTATCAGTATACTAGCAGGGTGT TTAAATCAAAACTTTTAACACAAGGCATGATACAAAGTATGTCGAGAGTTGGTCATTGTATTGACAATGCTCCTATGGAA GGATTTTGGGGAATTTTAAAAGTGGAAATGTACTATTTAAGGAAATTTGATACATACGAACAATTAGTCAAAGCAATAGA TGATTATATATATTACTATAATAATTTTAGATATCAAAAGAGATTAAATTCTATGTCTCCACTTGAATTTAGGAAATATT TAAGTACAGAGATAGCATAA Protein sequence : MVITLSKNEDKYKAIQSLFNEKKASLIQLCEIAKVNRSGYYKWLNRDKSNLELENIKLATLITKIYEEKKGVFGSLRMTL QLNREYKLNVNHKRVYRLMRAVGLRSICRKKKFSYVKCTQEVIAENVLNRKFSADKTSQKWLTDVTEFKLTDGTKAYLSA ILDLGDRSIVSYVIGKSNNNNLVFETFNKAIEVYPNAKPIFHSDRGYQYTSRVFKSKLLTQGMIQSMSRVGHCIDNAPME GFWGILKVEMYYLRKFDTYEQLVKAIDDYIYYYNNFRYQKRLNSMSPLEFRKYLSTEIA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EFAU085_00737 | YP_008394261.1 | ISEnfa3, transposase | Not tested | Not named | Protein | 3e-35 | 41 |
